RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 WDR24Q96S15 920 aa5.9□□□□□ -1.46
CDC42SE2-201ENST00000360515 MGME1Q9BQP7 344 aa5.9□□□□□ -1.46
CDC42SE2-201ENST00000360515 PDE7BQ9NP56 450 aa5.9□□□□□ -1.46
CDC42SE2-201ENST00000360515 PCDHB4Q9Y5E5 795 aa5.9□□□□□ -1.46
CDC42SE2-201ENST00000360515 FER1L5A0AVI2 2057 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 STC1P52823 247 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 IL10RBQ08334 325 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 EIF2S3LQ2VIR3 472 aaKnown RBP5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 ZNF658Q5TYW1 1059 aaPredicted RBP5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 TTC7BQ86TV6 843 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 PPP1R3BQ86XI6 285 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 ARHGEF19Q8IW93 802 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 FAM71BQ8TC56 605 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 PROKR1Q8TCW9 393 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 NSMCE3Q96MG7 304 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 GSDMAQ96QA5 445 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 VPS35Q96QK1 796 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 ACSS2Q9NR19 701 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 TCFL5Q9UL49 500 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 MED13LQ71F56 2210 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 KLF7O75840 302 aaPredicted RBP5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 MOCS2O96007 188 aaPredicted RBP5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 HBQ1P09105 142 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 FDXRP22570 491 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 SERPINA4P29622 427 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 GABRA4P48169 554 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 PTP4A2Q12974 167 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 TAF5Q15542 800 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 HENMT1Q5T8I9 393 aaKnown RBP5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 CPZQ66K79 652 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 MRPL14Q6P1L8 145 aaKnown RBP5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 RAB43Q86YS6 212 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 PELI3Q8N2H9 469 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 TADA1Q96BN2 335 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 FAM149B1Q96BN6 582 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 FER1L6-AS2Q96M78 137 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 TBCBQ99426 244 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 NAA15Q9BXJ9 866 aaKnown RBP5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 PITPNM3Q9BZ71 974 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 STN1Q9H668 368 aaKnown RBP5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 WDR54Q9H977 334 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 HPCAL4Q9UM19 191 aa5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 COPG1Q9Y678 874 aaKnown RBP5.9□□□□□ -1.47
CDC42SE2-201ENST00000360515 UNC13CQ8NB66 2214 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 RAI1Q7Z5J4 1906 aaPredicted RBP5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 CSMD1Q96PZ7 3565 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 MATN2O00339 956 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 RAMP2O60895 175 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 PMPCBO75439 489 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 CYP1A1P04798 512 aaPredicted RBP5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 PRKAR1AP10644 381 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 CYP2A6P11509 494 aaPredicted RBP5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 YBX1P67809 324 aaKnown RBP5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 CEP57L1Q8IYX8 460 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 ZDHHC12Q96GR4 267 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 RMND1Q9NWS8 449 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 SERTAD1Q9UHV2 236 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 KLK4Q9Y5K2 254 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 FOXO6A8MYZ6 492 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 INSIG1O15503 277 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 PTGIRP43119 386 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 HHEXQ03014 270 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 C19orf60Q96EN9 201 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 TIGD1Q96MW7 591 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 BLZF1Q9H2G9 400 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 SLC40A1Q9NP59 571 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 SIX2Q9NPC8 291 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 RAD18Q9NS91 495 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 NDFIP2Q9NV92 336 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 ARMCX3Q9UH62 379 aaPredicted RBP5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 COL12A1Q99715 3063 aa5.89□□□□□ -1.47
CDC42SE2-201ENST00000360515 A1L4Q6 167 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 C2CD4BA6NLJ0 364 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 K7ELQ4 463 aaPredicted RBP5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 NUAK1O60285 661 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 PCCBP05166 539 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 RPS15P62841 145 aaKnown RBP5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 DEUP1Q05D60 604 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 TFF3Q07654 80 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 PLCL1Q15111 1095 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 NKAIN2Q5VXU1 208 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 TTI2Q6NXR4 508 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 LRRC49Q8IUZ0 686 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 CHDHQ8NE62 594 aaPredicted RBP5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 CCDC47Q96A33 483 aaKnown RBP5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 DPEP2Q9H4A9 486 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 CARS2Q9HA77 564 aaKnown RBP5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 CPNE7Q9UBL6 633 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 TLCD2A6NGC4 264 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 KRIT1O00522 736 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 FANCGO15287 622 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 UBXN7O94888 489 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 EML2O95834 649 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 PYGMP11217 842 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 GNA15P30679 374 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 BPIFB4P59827 614 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 ZNF658BQ4V348 819 aaPredicted RBP5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 ATP13A4Q4VNC1 1196 aa5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 YOD1Q5VVQ6 348 aaPredicted RBP5.88□□□□□ -1.47
CDC42SE2-201ENST00000360515 CAMKMTQ7Z624 323 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms