RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 PCDHGB7Q9Y5F8 929 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 I3L521 148 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 KDELR1P24390 212 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 OR2B6P58173 313 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 USP49Q70CQ1 688 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 AHSA2Q719I0 299 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 C16orf58Q96GQ5 468 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 IQGAP1P46940 1657 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 E9PCH4 1651 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 IFNA21P01568 189 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 SP100P23497 879 aaPredicted RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 KCNK18Q7Z418 384 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 MSL3Q8N5Y2 521 aaKnown RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 ANKFN1Q8N957 763 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 PHC3Q8NDX5 983 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 PIGXQ8TBF5 258 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 ZSCAN5CA6NGD5 496 aaPredicted RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 ZBTB11O95625 1053 aaPredicted RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 CELF1Q92879 486 aaKnown RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 TOP1MTQ969P6 601 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 PRICKLE1Q96MT3 831 aaPredicted RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 TKTL2Q9H0I9 626 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 ALG2Q9H553 416 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 RNF181Q9P0P0 153 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 AZIN1O14977 448 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 LAMP2P13473 410 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 CD247P20963 164 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 LHCGRP22888 699 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 SLC12A3P55017 1021 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 DCDC1P59894 354 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 DET1Q7L5Y6 550 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 PTF1AQ7RTS3 328 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 AMIGO2Q86SJ2 522 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 TNS4Q8IZW8 715 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 TBATAQ96M53 351 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 DNAJC18Q9H819 358 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 EFCAB9A8MZ26 197 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 PRAMEF1O95521 474 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 FAM86B2P0C5J1 330 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 MAGP20916 626 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 SREBF1P36956 1147 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 PABPC1LQ4VXU2 614 aaKnown RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 TMEM86AQ8N2M4 240 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 YBX3P16989 372 aaKnown RBP eCLIP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 USP30Q70CQ3 517 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 ZYG11BQ9C0D3 744 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 NUDT15Q9NV35 164 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 PEX11AO75192 247 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 ALDH2P05091 517 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 ITGA2BP08514 1039 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 CCNB1P14635 433 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 MAPK14Q16539 360 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 PAMR1Q6UXH9 720 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 CIR1Q86X95 450 aaPredicted RBP9.26□□□□□ -0.93
VPS13A-203ENST00000360280 CXorf40BQ96DE9 158 aa9.26□□□□□ -0.93
VPS13A-203ENST00000360280 NUDT17P0C025 328 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 SLC35G4P0C7Q5 338 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF14P17017 642 aaPredicted RBP9.25□□□□□ -0.93
VPS13A-203ENST00000360280 PSMB4P28070 264 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TUFMP49411 452 aaKnown RBP9.25□□□□□ -0.93
VPS13A-203ENST00000360280 NDST1P52848 882 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 RP2O75695 350 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 GRB10Q13322 594 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 LIN52Q52LA3 116 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 LGI2Q8N0V4 545 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 CLP1Q92989 425 aaKnown RBP9.25□□□□□ -0.93
VPS13A-203ENST00000360280 SEZ6Q53EL9 994 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 CES3Q6UWW8 571 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 ALYREFQ86V81 257 aaKnown RBP9.25□□□□□ -0.93
VPS13A-203ENST00000360280 MCEMP1Q8IX19 187 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 C12orf43Q96C57 262 aaKnown RBP9.25□□□□□ -0.93
VPS13A-203ENST00000360280 HCN1O60741 890 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 AKAP3O75969 853 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 IFNW1P05000 195 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 CD44P16070 742 aaKnown RBP9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TEAD4Q15561 434 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 EPHA10Q5JZY3 1008 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 SLC30A6Q6NXT4 461 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 MREGQ8N565 214 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 ALLCQ8N6M5 410 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 MRPL9Q9BYD2 267 aaKnown RBP9.25□□□□□ -0.93
VPS13A-203ENST00000360280 DNAAF2Q9NVR5 837 aaKnown RBP9.25□□□□□ -0.93
VPS13A-203ENST00000360280 ZNHIT2Q9UHR6 403 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 ARPC4-TTLL3A0A0A6YYG9 625 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TSPAN3O60637 253 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TM7SF2O76062 418 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 ZNF3P17036 446 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 CAV3P56539 151 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 C11orf65Q8NCR3 313 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 FAM13CQ8NE31 585 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 GPATCH1Q9BRR8 931 aaKnown RBP9.25□□□□□ -0.93
VPS13A-203ENST00000360280 IRF2BPLQ9H1B7 796 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 S100A14Q9HCY8 104 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 MOCS1Q9NZB8 636 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 PER2O15055 1255 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 SLC2A2P11168 524 aaPredicted RBP9.25□□□□□ -0.93
VPS13A-203ENST00000360280 KIR3DL1P43629 444 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 KCNS3Q9BQ31 491 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TCF7L1Q9HCS4 588 aa9.25□□□□□ -0.93
VPS13A-203ENST00000360280 TREM1Q9NP99 234 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms