RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 MOSPD2Q8NHP6 518 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PHF10Q8WUB8 498 aaKnown RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SHDQ96IW2 340 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 ARHGAP39Q9C0H5 1083 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 ELAC1Q9H777 363 aaKnown RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 LRTM1Q9HBL6 345 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 SIX2Q9NPC8 291 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 DDX28Q9NUL7 540 aaKnown RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 ATP6V1HQ9UI12 483 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 NPHS1O60500 1241 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 PSMG1O95456 288 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 BLVRAP53004 296 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 CPTPQ5TA50 214 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 TYW3Q6IPR3 259 aaKnown RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 ZC3H3Q8IXZ2 948 aaKnown RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 GPR135Q8IZ08 494 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 TNS4Q8IZW8 715 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 EFCAB3Q8N7B9 438 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 POU5F2Q8N7G0 328 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 GLB1L3Q8NCI6 653 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 HIC2Q96JB3 615 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 RNPEPL1Q9HAU8 725 aa4.84□□□□□ -1.63
SCN3A-202ENST00000360093 WRAP73Q9P2S5 460 aaPredicted RBP4.84□□□□□ -1.63
SCN3A-202ENST00000360093 TCEA3O75764 348 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 PSMD8P48556 350 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 ST13P50502 369 aaKnown RBP4.84□□□□□ -1.64
SCN3A-202ENST00000360093 MANFP55145 182 aaKnown RBP4.84□□□□□ -1.64
SCN3A-202ENST00000360093 STX4Q12846 297 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 CCL14Q16627 93 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 CPSF6Q16630 551 aaKnown RBP eCLIP4.84□□□□□ -1.64
SCN3A-202ENST00000360093 GPAT3Q53EU6 434 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 C11orf88Q6PI97 169 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 FGD2Q7Z6J4 655 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 SLC30A8Q8IWU4 369 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 CNTD1Q8N815 330 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 ARL14EPQ8N8R7 260 aaPredicted RBP4.84□□□□□ -1.64
SCN3A-202ENST00000360093 KLHL23Q8NBE8 558 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 LRRN4CLQ8ND94 238 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 C19orf18Q8NEA5 215 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 PCDH19Q8TAB3 1148 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 AARSD1Q9BTE6 412 aaKnown RBP4.84□□□□□ -1.64
SCN3A-202ENST00000360093 NUSAP1Q9BXS6 441 aaKnown RBP4.84□□□□□ -1.64
SCN3A-202ENST00000360093 EVLQ9UI08 416 aaPredicted RBP4.84□□□□□ -1.64
SCN3A-202ENST00000360093 BUD23O43709 281 aaKnown RBP4.84□□□□□ -1.64
SCN3A-202ENST00000360093 PIRTP0C851 137 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 CBSLP0DN79 551 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 AKT2P31751 481 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 CBSP35520 551 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 ECT2LQ008S8 904 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 TLE2Q04725 743 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 ILF3Q12906 894 aaKnown RBP eCLIP4.84□□□□□ -1.64
SCN3A-202ENST00000360093 USP4Q13107 963 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 TCEAL1Q15170 157 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 CEP68Q76N32 757 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 WDR48Q8TAF3 677 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 PXYLP1Q8TE99 480 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 PCDH12Q9NPG4 1184 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 HMGXB4Q9UGU5 601 aa4.84□□□□□ -1.64
SCN3A-202ENST00000360093 TM7SF2O76062 418 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 MED26O95402 600 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 HNRNPCP07910 306 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 UMPSP11172 480 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 DRD4P21917 467 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 BUD31P41223 144 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 RPL26P61254 145 aaKnown RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 LGALS3BPQ08380 585 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 LCP2Q13094 533 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 ASTE1Q2TB18 679 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 FNBP1LQ5T0N5 605 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 MED27Q6P2C8 311 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 CACUL1Q86Y37 369 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 EPHX4Q8IUS5 362 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 TBC1D21Q8IYX1 336 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 SLC35F5Q8WV83 523 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF516Q92618 1163 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 CENPIQ92674 756 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 COL26A1Q96A83 441 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 LRMDAQ9H2I8 198 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 CCDC177Q9NQR7 707 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 IMP3Q9NV31 184 aaKnown RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 DTLQ9NZJ0 730 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 ZNF490Q9ULM2 529 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 CLDN4O14493 209 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 PI15O43692 258 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 PRPS2P11908 318 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 PTX3P26022 381 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 GSTM5P46439 218 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 STXBP1P61764 594 aaKnown RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 COL9A3Q14050 684 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 INAQ16352 499 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 POM121L1PQ3SYA9 428 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 CARD16Q5EG05 197 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 OTOP3Q7RTS5 596 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 CTU1Q7Z7A3 348 aaKnown RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 PCDH20Q8N6Y1 951 aaKnown RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 WDR36Q8NI36 951 aaKnown RBP4.83□□□□□ -1.64
SCN3A-202ENST00000360093 NPLOC4Q8TAT6 608 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 OTUB2Q96DC9 234 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 C1orf74Q96LT6 269 aa4.83□□□□□ -1.64
SCN3A-202ENST00000360093 RHOBTB2Q9BYZ6 727 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms