RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 LDLRAP1Q5SW96 308 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 TMEM214Q6NUQ4 689 aaKnown RBP13.66□□□□□ -0.22
VCP-201ENST00000358901 CDC73Q6P1J9 531 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 LINGO4Q6UY18 593 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 MACC1Q6ZN28 852 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 THAP5Q7Z6K1 395 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 ARMC8Q8IUR7 673 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 PSMG2Q969U7 264 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 FAXDC2Q96IV6 333 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 QRFPRQ96P65 431 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 DEPDC7Q96QD5 511 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 ZFYVE1Q9HBF4 777 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 RAD18Q9NS91 495 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 MAPRE3Q9UPY8 281 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 SQORQ9Y6N5 450 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 PRRC2BQ5JSZ5 2229 aaKnown RBP13.66□□□□□ -0.22
VCP-201ENST00000358901 OR6C75A6NL08 312 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 KIR3DL1P43629 444 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 HSPA7P48741 367 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 CCL23P55773 120 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 SPIBQ01892 262 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 MED22Q15528 200 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 CRTC3Q6UUV7 619 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 UBE2R2Q712K3 238 aaPredicted RBP13.66□□□□□ -0.22
VCP-201ENST00000358901 RASAL3Q86YV0 1011 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 UXS1Q8NBZ7 420 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 LEMD2Q8NC56 503 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 DDX1Q92499 740 aaKnown RBP13.66□□□□□ -0.22
VCP-201ENST00000358901 TUBGCP5Q96RT8 1024 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 OSBPL10Q9BXB5 764 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 TOR4AQ9NXH8 423 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 STK16O75716 305 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 OR4F21O95013 312 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 XRCC1P18887 633 aaPredicted RBP13.66□□□□□ -0.22
VCP-201ENST00000358901 SLC1A2P43004 574 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 COX10Q12887 443 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 PPM1LQ5SGD2 360 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 SLCO6A1Q86UG4 719 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 ZC3H3Q8IXZ2 948 aaKnown RBP13.66□□□□□ -0.22
VCP-201ENST00000358901 MCFD2Q8NI22 146 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 BORCS6Q96GS4 357 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 CCNB1IP1Q9NPC3 277 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 DGKBQ9Y6T7 804 aa13.66□□□□□ -0.22
VCP-201ENST00000358901 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 IQCF5A8MTL0 148 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 OR10H3O60404 316 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 GPIP06744 558 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 THRBP10828 461 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 ITGA2P17301 1181 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 SLC25A11Q02978 314 aaKnown RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 KCNJ11Q14654 390 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 FNDC3BQ53EP0 1204 aaKnown RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 TMEM110Q86TL2 294 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 CIR1Q86X95 450 aaPredicted RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 WDR48Q8TAF3 677 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 IRGQQ8WZA9 623 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 UBE2E3Q969T4 207 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 ADI1Q9BV57 179 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 BRD9Q9H8M2 597 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 ZNF624Q9P2J8 865 aaPredicted RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 RAB23Q9ULC3 237 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.65□□□□□ -0.22
VCP-201ENST00000358901 ATRNL1Q5VV63 1379 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 FAM208AQ9UK61 1670 aaKnown RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 TOP3BO95985 862 aaKnown RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 GOT2P00505 430 aaKnown RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 SLC6A2P23975 617 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 PTSQ03393 145 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 CYP20A1Q6UW02 462 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 NEK10Q6ZWH5 1172 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 PAGE2Q7Z2X7 111 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 HMCESQ96FZ2 354 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 SLC39A8Q9C0K1 460 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 TIMMDC1Q9NPL8 285 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 ANGPT4Q9Y264 503 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 ELOVL7A1L3X0 281 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 FAM159BA6NKW6 160 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 NPHS1O60500 1241 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 TMCC2O75069 709 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 CAPN1P07384 714 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 NR2F1P10589 423 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 GSTM5P46439 218 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 CSNK2BP67870 215 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 STX4Q12846 297 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 USP41Q3LFD5 358 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 ANO7Q6IWH7 933 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 CACTIN-AS1Q8N1I8 211 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 RTL3Q8N8U3 475 aaKnown RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 MTMR14Q8NCE2 650 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 S100ZQ8WXG8 99 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 ACBD6Q9BR61 282 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 TDRD1Q9BXT4 1180 aaKnown RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 PIGVQ9NUD9 493 aa13.65□□□□□ -0.22
VCP-201ENST00000358901 MRPS7Q9Y2R9 242 aaKnown RBP13.65□□□□□ -0.22
VCP-201ENST00000358901 DUOX1Q9NRD9 1551 aa13.65□□□□□ -0.23
VCP-201ENST00000358901 SLC7A4O43246 635 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 PBX3P40426 434 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 GLUD2P49448 558 aa13.64□□□□□ -0.23
VCP-201ENST00000358901 KLF1Q13351 362 aaPredicted RBP13.64□□□□□ -0.23
VCP-201ENST00000358901 ITGA7Q13683 1181 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms