RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 TOM1L1O75674 476 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 F2P00734 622 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 KRT7P08729 469 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 RBP1P09455 135 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CD58P19256 250 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 HNF1BP35680 557 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ARL2P36404 184 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 GARSP41250 739 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ENPEPQ07075 957 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 TRIM25Q14258 630 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 MORF4L2Q15014 288 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 PLCL1Q15111 1095 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 HIF1AQ16665 826 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 GNASQ5JWF2 1037 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 GLRA4Q5JXX5 417 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 PLEKHM3Q6ZWE6 761 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 TMPRSS9Q7Z410 1059 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 FAM9CQ8IZT9 166 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CARNMT1Q8N4J0 409 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 PPTC7Q8NI37 304 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 FANK1Q8TC84 345 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 NKD2Q969F2 451 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CEP19Q96LK0 163 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 SAMD11Q96NU1 681 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 OPALINQ96PE5 141 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 PIP5K1AQ99755 562 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ASNSD1Q9NWL6 643 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 SIRT5Q9NXA8 310 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 TAS2R7Q9NYW3 318 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 GLTPQ9NZD2 209 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CYB5R1Q9UHQ9 305 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 COMMD10Q9Y6G5 202 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 PABPN1LA6NDY0 278 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ZNF98A6NK75 572 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 C9IYK1 514 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 DLL1O00548 723 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 NTRK1P04629 796 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 MMP3P08254 477 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ENO3P13929 434 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 DDCP20711 480 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CYP3A5P20815 502 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CYP2A7P20853 494 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ABCE1P61221 599 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 SP140Q13342 867 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 SLC12A1Q13621 1099 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 MAPRE2Q15555 327 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ARSKQ6UWY0 536 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 PIGZQ86VD9 579 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 C12orf56Q8IXR9 622 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 KIAA0319LQ8IZA0 1049 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 NDNFQ8TB73 568 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 DNAJB3Q8WWF6 145 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CYGBQ8WWM9 190 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 RCN3Q96D15 328 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 UHRF1Q96T88 793 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 SEC22CQ9BRL7 303 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 TRAF4Q9BUZ4 470 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 COL25A1Q9BXS0 654 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 RHOBTB2Q9BYZ6 727 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 COPG2Q9UBF2 871 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CACNG4Q9UBN1 327 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 PCOLCE2Q9UKZ9 415 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CNOT6Q9ULM6 557 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ISPDA4D126 451 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 C16orf96A6NNT2 1141 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 TREHO43280 583 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ABCB7O75027 752 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CXCL8P10145 99 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 HOXB3P14651 431 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ALDH4A1P30038 563 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ARCN1P48444 511 aaKnown RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 POLD3Q15054 466 aaPredicted RBP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 GRIK4Q16099 956 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ERAP2Q6P179 960 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ZNF773Q6PK81 442 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 ABRAXAS1Q6UWZ7 409 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 C16orf89Q6UX73 402 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CTAGE3PQ8IX95 158 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 GPD1LQ8N335 351 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 SORT1Q99523 831 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 FAM105AQ9NUU6 356 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 FBXL12Q9NXK8 326 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 DTLQ9NZJ0 730 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 FAM8A1Q9UBU6 413 aa9.28□□□□□ -0.92
SMARCAL1-202ENST00000358207 EYSQ5T1H1 3165 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 MAGEB16A2A368 324 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 YKT6O15498 198 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 RFPL1O75677 317 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 IMPDH1P20839 514 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 ELK4P28324 431 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 GTF2E2P29084 291 aaKnown RBP9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 DDOSTP39656 456 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 CYP24A1Q07973 514 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 GRM7Q14831 915 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 BRDTQ58F21 947 aaPredicted RBP9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 Q7L0L9 218 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 VN1R5Q7Z5H4 357 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 SLC47A2Q86VL8 602 aa9.27□□□□□ -0.93
SMARCAL1-202ENST00000358207 AMIGO1Q86WK6 493 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms