RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 PPM1LQ5SGD2 360 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 HECTD3Q5T447 861 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 GPR158Q5T848 1215 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 LPCAT4Q643R3 524 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 TMEM198Q66K66 360 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 PTCRAQ6ISU1 281 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 MRNIPQ6NTE8 343 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 TMC5Q6UXY8 1006 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 DENND1CQ8IV53 801 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 ICA1LQ8NDH6 482 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 OR13C4Q8NGS5 318 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 PRICKLE1Q96MT3 831 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 SPON2Q9BUD6 331 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 Q9H521 79 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 SFXN1Q9H9B4 322 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 MEAF6Q9HAF1 191 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 CATSPERZQ9NTU4 200 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 ACTL7AQ9Y615 435 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 COCHO43405 550 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 CLDN11O75508 207 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 BCAS2O75934 225 aaPredicted RBP14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 ABLIM3O94929 683 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 SLC4A1P02730 911 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 PIRTP0C851 137 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 CD1EP15812 388 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 VCLP18206 1134 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 ALDH1A3P47895 512 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 THOP1P52888 689 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 RPS24P62847 133 aaKnown RBP14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 STX5Q13190 355 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 SMAD4Q13485 552 aaKnown RBP14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 GRM2Q14416 872 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 SEMA3AQ14563 771 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 ZNF549Q6P9A3 640 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 KLHDC10Q6PID8 442 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 PIM3Q86V86 326 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 ZNF461Q8TAF7 563 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 PSKH2Q96QS6 385 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 MRPL1Q9BYD6 325 aaKnown RBP14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 ALG9Q9H6U8 611 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 CRYL1Q9Y2S2 319 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 DTNAQ9Y4J8 743 aa14.24□□□□□ -0.13
NIPAL3-203ENST00000358028 TCAF2A6NFQ2 919 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 AP1G1O43747 822 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 SEC24AO95486 1093 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 C1RP00736 705 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 C8AP07357 584 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 RHOCP08134 193 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 IMPDH1P20839 514 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 RGRP47804 291 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 AQP4P55087 323 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 CHST9Q7L1S5 443 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 CUZD1Q86UP6 607 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 EFCAB3Q8N7B9 438 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 HIPK4Q8NE63 616 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 ADCY4Q8NFM4 1077 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 OR4L1Q8NH43 312 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 SH3RF2Q8TEC5 729 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 MARK4Q96L34 752 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 TUBGCP5Q96RT8 1024 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 CENPKQ9BS16 269 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 GSTO2Q9H4Y5 243 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 POPDC3Q9HBV1 291 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 TRIOO75962 3097 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 DOCK8Q8NF50 2099 aa14.23□□□□□ -0.13
NIPAL3-203ENST00000358028 ILVBLA1L0T0 632 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 TRIM38O00635 465 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 DENRO43583 198 aaKnown RBP14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 RNASEH1O60930 286 aaKnown RBP14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 STC2O76061 302 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 CRTAMO95727 393 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 CD1DP15813 335 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 HMGA1P17096 107 aaKnown RBP14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 CORO1AP31146 461 aaKnown RBP14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 HSPA13P48723 471 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 ATP4BP51164 291 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 SUOXP51687 545 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 SGSHP51688 502 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 ZNF140P52738 457 aaPredicted RBP14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 PLK1P53350 603 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 NFKB2Q00653 900 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 TIAL1Q01085 375 aaKnown RBP eCLIP14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 CEACAM7Q14002 265 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 TYSND1Q2T9J0 566 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 MMEL1Q495T6 779 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 RNF220Q5VTB9 566 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 ISCA2Q86U28 154 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 PHF21BQ96EK2 531 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 L3HYPDHQ96EM0 354 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 LRGUKQ96M69 825 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 NSMCE3Q96MG7 304 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 NLE1Q9NVX2 485 aaPredicted RBP14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 TRPM5Q9NZQ8 1165 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 AFF4Q9UHB7 1163 aaKnown RBP14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 SARDHQ9UL12 918 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 FIS1Q9Y3D6 152 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 MTF2Q9Y483 593 aaPredicted RBP14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 SPO11Q9Y5K1 396 aa14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.22□□□□□ -0.13
NIPAL3-203ENST00000358028 INSIG1O15503 277 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms