RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 FIGNL1Q6PIW4 674 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ZNF410Q86VK4 478 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 TMEM161BQ8NDZ6 487 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 FAM13CQ8NE31 585 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 TSPAN14Q8NG11 270 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 SORCS1Q8WY21 1168 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 RIPOR3Q96MK2 946 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ROPN1BQ9BZX4 212 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 XKR8Q9H6D3 395 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 REEP1Q9H902 201 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ROPN1Q9HAT0 212 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 INTS10Q9NVR2 710 aaKnown RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 DNAJB11Q9UBS4 358 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 OAS3Q9Y6K5 1087 aaKnown RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 A0A1W2PQJ5 194 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 SNAP91O60641 907 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 RECQL5O94762 991 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 OR4F21O95013 312 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MAPTP10636 758 aaKnown RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 DNASE1L1P49184 302 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 RAB27AP51159 221 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 PER3P56645 1201 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 PTCHD4Q6ZW05 846 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 DNAJB7Q7Z6W7 309 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 SLC43A3Q8NBI5 491 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 CAVIN3Q969G5 261 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 PCDHA2Q9Y5H9 948 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MAU2Q9Y6X3 613 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 GPR89AB7ZAQ6 455 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 FTH1P02794 183 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 GPR89BP0CG08 455 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 LPOP22079 712 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 TALDO1P37837 337 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 RAB14P61106 215 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ABATP80404 500 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ST3GAL1Q11201 340 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 CARD17Q5XLA6 110 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 TRIQKQ629K1 86 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 CDC73Q6P1J9 531 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 Q6ZVU0 165 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 GPR180Q86V85 440 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ZNF655Q8N720 491 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MBOAT7Q96N66 472 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MYEF2Q9P2K5 600 aaKnown RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ADGRE2Q9UHX3 823 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 BTBD3Q9Y2F9 522 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 PPEF2O14830 753 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 KCNQ1P51787 676 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 NTHL1P78549 312 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 PAGE2BQ5JRK9 111 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 DUPD1Q68J44 220 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MSANTD2Q6P1R3 559 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MAP4K3Q8IVH8 894 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 SYNPOQ8N3V7 929 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 FAM81AQ8TBF8 368 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 STAG3L4Q8TBR4 150 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 PPCDCQ96CD2 204 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 RCN3Q96D15 328 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 C8orf48Q96LL4 319 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 SLC17A7Q9P2U7 560 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 RNF225M0QZC1 329 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 TM7SF2O76062 418 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ZNF432O94892 652 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 CSF2RAP15509 400 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MAPK1P28482 360 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 GRIA1P42261 906 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 GDF5P43026 501 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 SCTRP47872 440 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MRPS35P82673 323 aaKnown RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 FMO1Q01740 532 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 UNC5BQ8IZJ1 945 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 OR6Y1Q8NGX8 325 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 EZH1Q92800 747 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 DNAJB4Q9UDY4 337 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ITSN2Q9NZM3 1697 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 TMED10P49755 219 aaKnown RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MAMLD1Q13495 774 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 PMF1Q6P1K2 205 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 SERPINA9Q86WD7 417 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 GALNT13Q8IUC8 556 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 C12orf56Q8IXR9 622 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 TNIP2Q8NFZ5 429 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 GDPD5Q8WTR4 605 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 KCNN2Q9H2S1 579 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 RBPJLQ9UBG7 517 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 RAPGEFL1Q9UHV5 662 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 PTPN9P43378 593 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ECH1Q13011 328 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 CA9Q16790 459 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 FAM46CQ5VWP2 391 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 RBM43Q6ZSC3 357 aaKnown RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 HJURPQ8NCD3 748 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 NELL1Q92832 810 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 PCDHB18PQ96TA0 734 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 FNDC11Q9BVV2 318 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 SLC39A8Q9C0K1 460 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ERVK-5Q9HDB9 667 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 GRXCR2A6NFK2 248 aa7.31□□□□□ -1.24
VPS13A-202ENST00000357409 H3BQF6 201 aa7.31□□□□□ -1.24
VPS13A-202ENST00000357409 RFPL2O75678 378 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms