RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 AFDNP55196 1824 aaKnown RBP11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 RFXANKO14593 260 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC9A3R1O14745 358 aaPredicted RBP11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 LDOC1O95751 146 aaPredicted RBP11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 FADS2O95864 444 aaKnown RBP11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC35G4P0C7Q5 338 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 CYP2C18P33260 490 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 CRHR1P34998 444 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 ITGA7Q13683 1181 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 LSM12Q3MHD2 195 aaKnown RBP11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 CRY2Q49AN0 593 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 GALNT7Q86SF2 657 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 ECHDC2Q86YB7 292 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC34A3Q8N130 599 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 MCMBPQ9BTE3 642 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 ACAT2Q9BWD1 397 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 SPATC1LQ9H0A9 340 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 ETNK2Q9NVF9 386 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 MRPS23Q9Y3D9 190 aaKnown RBP11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 E5RJQ4 531 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 DDX3YO15523 660 aaKnown RBP11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 ERP29P30040 261 aaKnown RBP11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 SLC27A1Q6PCB7 646 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 FAM151BQ6UXP7 276 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 ANKFN1Q8N957 763 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 PLLPQ9Y342 182 aa11.46□□□□□ -0.57
SPTBN1-202ENST00000356805 QSOX1O00391 747 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 RBL1P28749 1068 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 GRSF1Q12849 480 aaKnown RBP eCLIP11.46□□□□□ -0.586e-16■□□□□ 8.7
SPTBN1-202ENST00000356805 CBX2Q14781 532 aaPredicted RBP11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 TMEM119Q4V9L6 283 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 CLHC1Q8NHS4 586 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 SGCDQ92629 289 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 CLPTM1LQ96KA5 538 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 IMP3Q9NV31 184 aaKnown RBP11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 OR12D3Q9UGF7 316 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 PACSIN3Q9UKS6 424 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 CHD1O14646 1710 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 CLTCQ00610 1675 aaKnown RBP11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 NRP2O60462 931 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 ULK1O75385 1050 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 MIPP30301 263 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 PCDH1Q08174 1060 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 PGM5Q15124 567 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 PABPC1LQ4VXU2 614 aaKnown RBP11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 SLC30A6Q6NXT4 461 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 METTL7BQ6UX53 244 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 DGLUCYQ7Z3D6 616 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 DNASE1L2Q92874 299 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 ZDHHC15Q96MV8 337 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 MCCC1Q96RQ3 725 aaPredicted RBP11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 PCDH18Q9HCL0 1135 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 MED11Q9P086 117 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 CFL2Q9Y281 166 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 FSCN2O14926 492 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 CCNB1P14635 433 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 MAGP20916 626 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 BEX3Q00994 111 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 WDR59Q6PJI9 974 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 PSTKQ8IV42 348 aaKnown RBP11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 PMEPA1Q969W9 287 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 RCN3Q96D15 328 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 NODALQ96S42 347 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 AARSD1Q9BTE6 412 aaKnown RBP11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 ABCB9Q9NP78 766 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 SLCO1B3Q9NPD5 702 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 MYH15Q9Y2K3 1946 aa11.46□□□□□ -0.58
SPTBN1-202ENST00000356805 TBC1D3DA0A087WVF3 549 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TBC1D3IA0A087WXS9 549 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TBC1D3EA0A087X179 549 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TBC1D3KA0A087X1G2 549 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 FAM172BPA6NC97 362 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TBC1D3FA6NER0 549 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TBC1D3LB9A6J9 549 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 SLC25A14O95258 325 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TBC1D3HP0C7X1 549 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 PIRTP0C851 137 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 CDH5P33151 784 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 NDUFV1P49821 464 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ECT2LQ008S8 904 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ZNF829Q3KNS6 432 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TBC1D3GQ6DHY5 549 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TBC1D3CQ6IPX1 549 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 AFTPHQ6ULP2 937 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TBC1D3Q8IZP1 549 aaPredicted RBP11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 AGBL3Q8NEM8 1001 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ATPIF1Q9UII2 106 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ASF1AQ9Y294 204 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 U3KQV3 271 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 CLTCL1P53675 1640 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 SMCO3A2RU48 225 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 BPNT1O95861 308 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ERBB2P04626 1255 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 GLRA2P23416 452 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 SLC5A3P53794 718 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 TPTEP56180 551 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ACTR3P61158 418 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 SP140Q13342 867 aa11.45□□□□□ -0.58
SPTBN1-202ENST00000356805 ZBED5Q49AG3 693 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms