RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ZSCAN5DPP0CG00 497 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 GABRR2P28476 465 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 MAPK10P53779 464 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 WNT3AP56704 352 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 NOGQ13253 232 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 ITGB3BPQ13352 177 aaPredicted RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 CPSF6Q16630 551 aaKnown RBP eCLIP6.44□□□□□ -1.381e-6■■□□□ 14.4
UPF2-201ENST00000356352 EIPR1Q53HC9 387 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 C9orf57Q5W0N0 161 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FAM91A1Q658Y4 838 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 CRTC3Q6UUV7 619 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 SH3RF1Q7Z6J0 888 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FUKQ8N0W3 1084 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 MSL3Q8N5Y2 521 aaKnown RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 C12orf50Q8NA57 414 aaPredicted RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 DNAJB8Q8NHS0 232 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 C2orf15Q8WU43 125 aaKnown RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 STYXQ8WUJ0 223 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FRMD6Q96NE9 622 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 IL25Q9H293 177 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 PFDN2Q9UHV9 154 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 ZNF490Q9ULM2 529 aaPredicted RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 TRAF6Q9Y4K3 522 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 LRRC10BA6NIK2 292 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 SAGE2PA6NJ88 616 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 LRRC72A6NJI9 287 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 LOC110117498-PIK3R3F6TDL0 507 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 PAGE1O75459 146 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 IPO13O94829 963 aaKnown RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 CLDN9O95484 217 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 ASLP04424 464 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 CLUP10909 449 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 PRDX6P30041 224 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 CRHR1P34998 444 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 CTSKP43235 329 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 PTPN5P54829 565 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 STXBP1P61764 594 aaKnown RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 PPP3R1P63098 170 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 DLG4P78352 724 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FMO1Q01740 532 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 SIX5Q8N196 739 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 CPSF7Q8N684 471 aaKnown RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 ADCY4Q8NFM4 1077 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 LNX1Q8TBB1 728 aaPredicted RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 PIK3R3Q92569 461 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 HDAC10Q969S8 669 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 RCN3Q96D15 328 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 MFSD14AQ96MC6 490 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FCRL4Q96PJ5 515 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 PNPLA8Q9NP80 782 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FAM105AQ9NUU6 356 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 MIOSQ9NXC5 875 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 HCN3Q9P1Z3 774 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 CFAP97Q9P2B7 532 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 DEC1Q9P2X7 70 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 ADGRE2Q9UHX3 823 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 AK5Q9Y6K8 562 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FADS2P1A8MWK0 482 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 PDCD5O14737 125 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FSCN2O14926 492 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 RHOQP17081 205 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 GSTT1P30711 240 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 HNF4AP41235 474 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 KIR3DL1P43629 444 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 AVPR1BP47901 424 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 POLR2JP52435 117 aaKnown RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 YBEYP58557 167 aaPredicted RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 SLC20A2Q08357 652 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 SF1Q15637 639 aaKnown RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 TSC22D1Q15714 1073 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 SMU1Q2TAY7 513 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 MTX3Q5HYI7 312 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FNBP1LQ5T0N5 605 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 RGMBQ6NW40 437 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 MED27Q6P2C8 311 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 C10orf107Q8IVU9 208 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 SLC43A3Q8NBI5 491 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 PIGXQ8TBF5 258 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 HCAR2Q8TDS4 363 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 BORCS5Q969J3 196 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FCRL2Q96LA5 508 aaPredicted RBP6.44□□□□□ -1.38
UPF2-201ENST00000356352 BRINP2Q9C0B6 783 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 COMMD4Q9H0A8 199 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 FANCFQ9NPI8 374 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 COPS7AQ9UBW8 275 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 PCDHGB5Q9Y5G0 923 aa6.44□□□□□ -1.38
UPF2-201ENST00000356352 AK9Q5TCS8 1911 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 A0A0J9YYE9 177 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 PLOD3O60568 738 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 TULP3O75386 442 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 LYPLA2O95372 231 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 SLC35G6P0C7Q6 338 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 THRBP10828 461 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 LAMP2P13473 410 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 PKMP14618 531 aaKnown RBP6.43□□□□□ -1.38
UPF2-201ENST00000356352 CD52P31358 61 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 CCNFP41002 786 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 PTDSS1P48651 473 aaKnown RBP6.43□□□□□ -1.38
UPF2-201ENST00000356352 MASP1P48740 699 aa6.43□□□□□ -1.38
UPF2-201ENST00000356352 CYP4F2P78329 520 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms