RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PPM1DO15297 605 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 CBFA2T2O43439 604 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 JCHAINP01591 159 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 ITGB2P05107 769 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 SFTPCP11686 197 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 CCL4P13236 92 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 SLC2A4P14672 509 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 PTMSP20962 102 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 KDELR1P24390 212 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 MAN1A1P33908 653 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 CD86P42081 329 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 ATP1A2P50993 1020 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 GBE1Q04446 702 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 AP1B1Q10567 949 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 SQSTM1Q13501 440 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 MESDQ14696 234 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 SLC18A3Q16572 532 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 ALG1LQ6GMV1 187 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 CCDC70Q6NSX1 233 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 TMEM71Q6P5X7 295 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 OR8K1Q8NGG5 319 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 ARRDC2Q8TBH0 407 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 HDAC11Q96DB2 347 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 COX14Q96I36 57 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 RNF157Q96PX1 679 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 SMIM14Q96QK8 99 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 AGAP2Q99490 1192 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 VPS18Q9P253 973 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 HEMK1Q9Y5R4 338 aaPredicted RBP10.58□□□□□ -0.72
CAPN3-204ENST00000356316 ST14Q9Y5Y6 855 aa10.58□□□□□ -0.72
CAPN3-204ENST00000356316 LRRD1A4D1F6 860 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 DUX1O43812 170 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 SNX2O60749 519 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 ZIC2O95409 532 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-204ENST00000356316 SOD1P00441 154 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 ATP1A1P05023 1023 aaKnown RBP10.57□□□□□ -0.72
CAPN3-204ENST00000356316 HLA-DQB2P05538 268 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 FGF3P11487 239 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-204ENST00000356316 ZFXP17010 805 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-204ENST00000356316 MPSTP25325 297 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 HNRNPH3P31942 346 aaKnown RBP10.57□□□□□ -0.72
CAPN3-204ENST00000356316 ARHGAP25P42331 645 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 NOP2P46087 812 aaKnown RBP10.57□□□□□ -0.72
CAPN3-204ENST00000356316 FASLGP48023 281 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 SPINT3P49223 89 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 TAS2R40P59535 323 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 HHEXQ03014 270 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 NIPAL4Q0D2K0 466 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 TRIM14Q14142 442 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 DCAF12Q5T6F0 453 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 SLC9B2Q86UD5 537 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 VASH2Q86V25 355 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 FAM129CQ86XR2 697 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 IL22RA1Q8N6P7 574 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 SLC35G2Q8TBE7 412 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 SLC37A2Q8TED4 501 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 LRRN4Q8WUT4 740 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 JPH3Q8WXH2 748 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-204ENST00000356316 CCDC42Q96M95 316 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 HS3ST6Q96QI5 342 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 LYSMD1Q96S90 227 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.57□□□□□ -0.72
CAPN3-204ENST00000356316 SEMA4CQ9C0C4 833 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 XPO4Q9C0E2 1151 aaKnown RBP10.57□□□□□ -0.72
CAPN3-204ENST00000356316 ZFYVE1Q9HBF4 777 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 RAD18Q9NS91 495 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 SLC39A1Q9NY26 324 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 DTLQ9NZJ0 730 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 FOXJ2Q9P0K8 574 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 PRKAB1Q9Y478 270 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 CFAP46Q8IYW2 2715 aa10.57□□□□□ -0.72
CAPN3-204ENST00000356316 ZFC3H1O60293 1989 aaKnown RBP10.56□□□□□ -0.72
CAPN3-204ENST00000356316 BOD1L1Q8NFC6 3051 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 OR5K4A6NMS3 321 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 A8MU76 341 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 KCNK1O00180 336 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 APOL1O14791 398 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 PPP1R12AO14974 1030 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-204ENST00000356316 GRID2O43424 1007 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 SLC28A2O43868 658 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 SLC25A14O95258 325 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-204ENST00000356316 PRLP01236 227 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 TMEM253P0C7T8 217 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 TNNT3P45378 269 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-204ENST00000356316 RAB15P59190 212 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 PPIDQ08752 370 aaKnown RBP10.56□□□□□ -0.72
CAPN3-204ENST00000356316 SLC10A2Q12908 348 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-204ENST00000356316 NFATC2Q13469 925 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 PDK1Q15118 436 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 QPCTQ16769 361 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 SNAP47Q5SQN1 464 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 IYDQ6PHW0 289 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 WDR74Q6RFH5 385 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-204ENST00000356316 BZW1Q7L1Q6 419 aaKnown RBP10.56□□□□□ -0.72
CAPN3-204ENST00000356316 LYSMD3Q7Z3D4 306 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 KDELC2Q7Z4H8 507 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 NT5DC3Q86UY8 548 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 DTX1Q86Y01 620 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 PHYKPLQ8IUZ5 450 aa10.56□□□□□ -0.72
CAPN3-204ENST00000356316 SFRP1Q8N474 314 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms