RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 GPR65Q8IYL9 337 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 FBXL16Q8N461 479 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 HMX1Q9NP08 348 aaPredicted RBP14.83□□□□□ -0.04
LMX1B-201ENST00000355497 ACP6Q9NPH0 428 aa14.83□□□□□ -0.04
LMX1B-201ENST00000355497 IFT80Q9P2H3 777 aaPredicted RBP14.83□□□□□ -0.04
LMX1B-201ENST00000355497 MRPS23Q9Y3D9 190 aaKnown RBP14.83□□□□□ -0.04
LMX1B-201ENST00000355497 GATBO75879 557 aaKnown RBP14.82□□□□□ -0.04
LMX1B-201ENST00000355497 PGRP06401 933 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 CDH4P55283 916 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 PCDH1Q08174 1060 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 GALNTL5Q7Z4T8 443 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 ACO2Q99798 780 aaKnown RBP14.82□□□□□ -0.04
LMX1B-201ENST00000355497 TRIM2Q9C040 744 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 LRTM1Q9HBL6 345 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 PNPLA8Q9NP80 782 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 SLC17A7Q9P2U7 560 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 SPATA31A5Q5VU36 1347 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 SPATA31A7Q8IWB4 1347 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 RIIAD1A6NNX1 92 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 TNFRSF11BO00300 401 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 SLC30A4O14863 429 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 UBA1P22314 1058 aaKnown RBP14.82□□□□□ -0.04
LMX1B-201ENST00000355497 MPSTP25325 297 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 GRM3Q14832 879 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 PMM1Q92871 262 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 RFT1Q96AA3 541 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 TPK1Q9H3S4 243 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 SLCO1B3Q9NPD5 702 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 PTCH2Q9Y6C5 1203 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 ITPKAP23677 461 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 MATKP42679 507 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 PLA2G4EQ3MJ16 856 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 NOMO2Q5JPE7 1267 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 ZNF697Q5TEC3 545 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 CHST4Q8NCG5 386 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 SNX33Q8WV41 574 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 TIFAQ96CG3 184 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 UPB1Q9UBR1 384 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 FADS2P1A8MWK0 482 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 MPZL2O60487 215 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 SMIM10L2AP0DMW4 78 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 SMIM10L2BP0DMW5 78 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 PSMA1P25786 263 aaKnown RBP14.82□□□□□ -0.04
LMX1B-201ENST00000355497 CRHR1P34998 444 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 MARCKSL1P49006 195 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 KLHL35Q6PF15 583 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 TRABD2AQ86V40 505 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 KIAA0319LQ8IZA0 1049 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 HELQQ8TDG4 1101 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 TCF25Q9BQ70 676 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 BRINP2Q9C0B6 783 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 GULP1Q9UBP9 304 aa14.82□□□□□ -0.04
LMX1B-201ENST00000355497 ABLIM1O14639 778 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 SP100P23497 879 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 AQP1P29972 269 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 GNPDA1P46926 289 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 ZNF155Q12901 538 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 ITGA7Q13683 1181 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 ZMYND11Q15326 602 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 THOC7Q6I9Y2 204 aaKnown RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 ZNF613Q6PF04 617 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 PNPT1Q8TCS8 783 aaKnown RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 PIK3R3Q92569 461 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 AGXT2Q9BYV1 514 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 TTYH1Q9H313 450 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 RHOJQ9H4E5 214 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 CPS1P31327 1500 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 PRMT5O14744 637 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 RPP40O75818 363 aaKnown RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 ASMTP46597 345 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 GALK1P51570 392 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 ATXN1P54253 815 aaKnown RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 CDH13P55290 713 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 NOMO3P69849 1222 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 LIPEQ05469 1076 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 E2F2Q14209 437 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 SMU1Q2TAY7 513 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 CMC1Q7Z7K0 106 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 UBR7Q8N806 425 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 OR5T3Q8NGG3 340 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 DNASE1L2Q92874 299 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 RMI1Q9H9A7 625 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 DNAJC11Q9NVH1 559 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 MTRRQ9UBK8 725 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 SETBP1Q9Y6X0 1596 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 ABCA6Q8N139 1617 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 UNC13BO14795 1591 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 SEPHS1P49903 392 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 ELP6Q0PNE2 266 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 BMT2Q1RMZ1 405 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 PPP1R26Q5T8A7 1209 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 RNASEH2BQ5TBB1 312 aaKnown RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 ZCCHC12Q6PEW1 402 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 POMZP3Q6PJE2 187 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 MCEMP1Q8IX19 187 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 ZBTB2Q8N680 514 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 CCDC28BQ9BUN5 200 aa14.81□□□□□ -0.04
LMX1B-201ENST00000355497 CHMP1AQ9HD42 196 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-201ENST00000355497 IMP3Q9NV31 184 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms