RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 GKN1Q9NS71 199 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 PCDHGC4Q9Y5F7 938 aa22.14■■□□□ 1.13
NKX2-1-201ENST00000354822 TET1Q8NFU7 2136 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 PRORSD1PA6NEY8 169 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 H7C0S8 307 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 PPP6CO00743 305 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 STX7O15400 261 aaKnown RBP22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 ECI2O75521 394 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 MT-CO1P00395 513 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 FESP07332 822 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 HDCP19113 662 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 TAF12Q16514 161 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 MAP7D1Q3KQU3 841 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 KIAA1841Q6NSI8 718 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 UGT2A3Q6UWM9 527 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 TMEM102Q8N9M5 508 aaPredicted RBP22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 OR9I1Q8NGQ6 314 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 ZNF461Q8TAF7 563 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 FUBP1Q96AE4 644 aaKnown RBP22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 KLF16Q9BXK1 252 aaPredicted RBP22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 TRMT6Q9UJA5 497 aaKnown RBP22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 TRIM17Q9Y577 477 aa22.13■■□□□ 1.13
NKX2-1-201ENST00000354822 H0YJX3 145 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 DNAJA2O60884 412 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 CRCPO75575 148 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 MLYCDO95822 493 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 RPS17P08708 135 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 IDO1P14902 403 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 MC4RP32245 332 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 ATXN3P54252 364 aaPredicted RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 ADARP55265 1226 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 GRIK2Q13002 908 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 TSNQ15631 228 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 PABPC1LQ4VXU2 614 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 INO80DQ53TQ3 878 aaPredicted RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 IRAK1BP1Q5VVH5 260 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 PHYKPLQ8IUZ5 450 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 TSPEARQ8WU66 669 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 TUBGCP3Q96CW5 907 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 NSUN5Q96P11 429 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 EFHD1Q9BUP0 239 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 NUSAP1Q9BXS6 441 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 LRRC14BA6NHZ5 514 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 AHCYL1O43865 530 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 RPL17P18621 184 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 SGSHP51688 502 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 IL2P60568 153 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 RPS6KA2Q15349 733 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 TLR1Q15399 786 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 COQ5Q5HYK3 327 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 TPGS2Q68CL5 300 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 CXorf57Q6NSI4 855 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 UGT3A1Q6NUS8 523 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 FBXL19Q6PCT2 694 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 SPATA19Q7Z5L4 167 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 PBXIP1Q96AQ6 731 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 TRMT2BQ96GJ1 504 aaKnown RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 PCDHAC1Q9H158 963 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 SDR39U1Q9NRG7 319 aaPredicted RBP22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 STOML2Q9UJZ1 356 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 SCN5AQ14524 2016 aa22.12■■□□□ 1.13
NKX2-1-201ENST00000354822 TCRBV3S1A0A5B6 114 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 TSPAN3O60637 253 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 PQBP1O60828 265 aaKnown RBP22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 RNASEH2AO75792 299 aaKnown RBP22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 ABLIM3O94929 683 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 SLC7A1P30825 629 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 FOXA1P55317 472 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 ARF5P84085 180 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 IL23RQ5VWK5 629 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 OGFOD2Q6N063 350 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 NCEH1Q6PIU2 408 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 STK40Q8N2I9 435 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 FKBPLQ9UIM3 349 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 TANC1Q9C0D5 1861 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 BTN3A1O00481 513 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 TMCC1O94876 653 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 SEC24AO95486 1093 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 LATS1O95835 1130 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 CHEK2O96017 543 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 C1RP00736 705 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 PTGER3P43115 390 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 EML3Q32P44 896 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 SPATS1Q496A3 300 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 FOXB2Q5VYV0 432 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 LAYNQ6UX15 382 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 C16orf59Q7L2K0 433 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 RNF168Q8IYW5 571 aaPredicted RBP22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 MINDY1Q8N5J2 469 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 KCNJ9Q92806 393 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 ATP6V1E2Q96A05 226 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 SCLYQ96I15 445 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 CCT7Q99832 543 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 GPATCH1Q9BRR8 931 aaKnown RBP22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 RNF38Q9H0F5 515 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 TUBB1Q9H4B7 451 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 GID8Q9NWU2 228 aa22.11■■□□□ 1.13
NKX2-1-201ENST00000354822 CDC7O00311 574 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 ANGPT2O15123 496 aa22.1■■□□□ 1.13
NKX2-1-201ENST00000354822 ESR1P03372 595 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms