RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TXNDC11Q6PKC3 985 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 DSG4Q86SJ6 1040 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 PPP1R16AQ96I34 528 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 BIRC8Q96P09 236 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 KCNK12Q9HB15 430 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 DYRK4Q9NR20 520 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 SIRPGQ9P1W8 387 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 CPSF2Q9P2I0 782 aaKnown RBP20.41■□□□□ 0.86
TRIM4-202ENST00000354241 COPG2Q9UBF2 871 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 ITM2BQ9Y287 266 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 MTF2Q9Y483 593 aaPredicted RBP20.41■□□□□ 0.86
TRIM4-202ENST00000354241 COL4A2P08572 1712 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 PLXNB3Q9ULL4 1909 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 K7EQS6 105 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 CCDC166P0CW27 439 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 PKMP14618 531 aaKnown RBP20.41■□□□□ 0.86
TRIM4-202ENST00000354241 CPA3P15088 417 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 CTHP32929 405 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 MMP12P39900 470 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 PSMD8P48556 350 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 TIAL1Q01085 375 aaKnown RBP eCLIP20.41■□□□□ 0.86
TRIM4-202ENST00000354241 RALGDSQ12967 914 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 CTSL3PQ5NE16 218 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 HSD11B1LQ7Z5J1 315 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 PPP1R14CQ8TAE6 165 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 HEXDCQ8WVB3 486 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 PLEKHG4BQ96PX9 1271 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 IGSF5Q9NSI5 407 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 FAM50BQ9Y247 325 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 ATG2BQ96BY7 2078 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 C1QTNF3-AMACRE9PGA6 284 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 PLK4O00444 970 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 APOA4P06727 396 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 LTA4HP09960 611 aaKnown RBP20.4■□□□□ 0.86
TRIM4-202ENST00000354241 ACRV1P26436 265 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 KPNA2P52292 529 aaKnown RBP20.4■□□□□ 0.86
TRIM4-202ENST00000354241 FAM83EQ2M2I3 478 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 GPR33Q49SQ1 333 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 GKAP1Q5VSY0 366 aaPredicted RBP20.4■□□□□ 0.86
TRIM4-202ENST00000354241 LYPLAL1Q5VWZ2 237 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 TMEM207Q6UWW9 146 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 CCDC91Q7Z6B0 441 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 C10orf107Q8IVU9 208 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 FSTL5Q8N475 847 aaPredicted RBP20.4■□□□□ 0.86
TRIM4-202ENST00000354241 EZH1Q92800 747 aaPredicted RBP20.4■□□□□ 0.86
TRIM4-202ENST00000354241 GPR78Q96P69 363 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 TAS2R13Q9NYV9 303 aa20.4■□□□□ 0.86
TRIM4-202ENST00000354241 TRBV5-4A0A0C4DH59 114 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 TK2O00142 265 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 EDF1O60869 148 aaKnown RBP20.39■□□□□ 0.86
TRIM4-202ENST00000354241 ELFN1P0C7U0 828 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 ZNF7P17097 686 aaPredicted RBP20.39■□□□□ 0.86
TRIM4-202ENST00000354241 SUOXP51687 545 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 AGAP9Q5VTM2 703 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 ATG16L1Q676U5 607 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 ZCCHC23Q6ZST2 131 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 SLC44A3Q8N4M1 653 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 ANKRD49Q8WVL7 239 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 CCDC97Q96F63 343 aaPredicted RBP20.39■□□□□ 0.86
TRIM4-202ENST00000354241 POPDC3Q9HBV1 291 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 HEBP1Q9NRV9 189 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 MID2Q9UJV3 735 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 PIAS3Q9Y6X2 628 aa20.39■□□□□ 0.86
TRIM4-202ENST00000354241 PRMT5O14744 637 aaPredicted RBP20.39■□□□□ 0.85
TRIM4-202ENST00000354241 NIPSNAP2O75323 286 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 VPS26AO75436 327 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 WISP3O95389 354 aaPredicted RBP20.39■□□□□ 0.85
TRIM4-202ENST00000354241 ETV3P41162 512 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 KIR2DL1P43626 348 aaPredicted RBP20.39■□□□□ 0.85
TRIM4-202ENST00000354241 PON2Q15165 354 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 E2F5Q15329 346 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 ATP13A5Q4VNC0 1218 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 KLC3Q6P597 504 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 RBFAQ8N0V3 343 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 NXPE1Q8N323 547 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 PLCD3Q8N3E9 789 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 WRAP53Q9BUR4 548 aaKnown RBP20.39■□□□□ 0.85
TRIM4-202ENST00000354241 BOCQ9BWV1 1114 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 PHF7Q9BWX1 381 aaPredicted RBP20.39■□□□□ 0.85
TRIM4-202ENST00000354241 TSSK1BQ9BXA7 367 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 SPATA16Q9BXB7 569 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 CLPBQ9H078 707 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 P2RY12Q9H244 342 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 XPR1Q9UBH6 696 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 PRDM4Q9UKN5 801 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 COMMD10Q9Y6G5 202 aa20.39■□□□□ 0.85
TRIM4-202ENST00000354241 PLXNA2O75051 1894 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 CKAP5Q14008 2032 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 E5RI56 91 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 G3V2L1 256 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 KLF11O14901 512 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 ESR1P03372 595 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 MYL2P10916 166 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 ADRB3P13945 408 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 ADARP55265 1226 aaKnown RBP20.38■□□□□ 0.85
TRIM4-202ENST00000354241 ENPP2Q13822 863 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 ZSCAN26Q16670 478 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 CGB2Q6NT52 195 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 FOXR1Q6PIV2 292 aa20.38■□□□□ 0.85
TRIM4-202ENST00000354241 LIPIQ6XZB0 460 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms