RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 RBP1P09455 135 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 CAPN3P20807 821 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 ACVR2AP27037 513 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 ATXN1P54253 815 aaKnown RBP14.88□□□□□ -0.03
TRAF3-202ENST00000351691 DPY19L1Q2PZI1 675 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 SMUG1Q53HV7 270 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 PAGE2BQ5JRK9 111 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 MARCH8Q5T0T0 291 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 ADCK1Q86TW2 530 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 KLHDC8BQ8IXV7 354 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 OR13J1Q8NGT2 312 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 DYNC2LI1Q8TCX1 351 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 RNF139Q8WU17 664 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 VPS33AQ96AX1 596 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 C19orf60Q96EN9 201 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 CLSTN3Q9BQT9 956 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 MLPHQ9BV36 600 aaPredicted RBP14.88□□□□□ -0.03
TRAF3-202ENST00000351691 KATNBL1Q9H079 304 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 ALG2Q9H553 416 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 IGSF5Q9NSI5 407 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 UBQLN1Q9UMX0 589 aaKnown RBP14.88□□□□□ -0.03
TRAF3-202ENST00000351691 FIS1Q9Y3D6 152 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 NOTOA8MTQ0 251 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 SNPHO15079 494 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 TBC1D4O60343 1298 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 USP12O75317 370 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 UPK1BO75841 260 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 CDH1P12830 882 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 YWHAQP27348 245 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 EIF2DP41214 584 aaKnown RBP14.88□□□□□ -0.03
TRAF3-202ENST00000351691 KRT6CP48668 564 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 CDH17Q12864 832 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 FAM83EQ2M2I3 478 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 DCP1BQ8IZD4 617 aaKnown RBP14.88□□□□□ -0.03
TRAF3-202ENST00000351691 PYROXD2Q8N2H3 581 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 OR6B3Q8NGW1 331 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 ZNF566Q969W8 418 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 KCTD14Q9BQ13 255 aaPredicted RBP14.88□□□□□ -0.03
TRAF3-202ENST00000351691 CHID1Q9BWS9 393 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 GSTO2Q9H4Y5 243 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 NEK6Q9HC98 313 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 FAM49BQ9NUQ9 324 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 SNTG2Q9NY99 539 aa14.88□□□□□ -0.03
TRAF3-202ENST00000351691 EIF3LQ9Y262 564 aaKnown RBP14.88□□□□□ -0.03
TRAF3-202ENST00000351691 TTC34A8MYJ7 566 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 TAF4O00268 1085 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 EIF3FO00303 357 aaPredicted RBP14.87□□□□□ -0.03
TRAF3-202ENST00000351691 UPK1AO00322 258 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 NDST3O95803 873 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 PTTG1O95997 202 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 ZNF286BP0CG31 522 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 ARSAP15289 507 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 NOS2P35228 1153 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 PNPLA4P41247 253 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 ALDH7A1P49419 539 aaKnown RBP14.87□□□□□ -0.03
TRAF3-202ENST00000351691 KIF19Q2TAC6 998 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 GJC2Q5T442 439 aaPredicted RBP14.87□□□□□ -0.03
TRAF3-202ENST00000351691 AGAP9Q5VTM2 703 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 C9orf57Q5W0N0 161 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 ALKAL1Q6UXT8 129 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 CCDC117Q8IWD4 279 aaPredicted RBP14.87□□□□□ -0.03
TRAF3-202ENST00000351691 PJA1Q8NG27 643 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 ATL1Q8WXF7 558 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 BIRC7Q96CA5 298 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 YIPF6Q96EC8 236 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 L3HYPDHQ96EM0 354 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 ZNF560Q96MR9 790 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 ASB2Q96Q27 587 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 NODALQ96S42 347 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 VAT1Q99536 393 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 IL1RL2Q9HB29 575 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 NTN4Q9HB63 628 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 SLC52A3Q9NQ40 469 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 NPAP1Q9NZP6 1156 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 SLC45A1Q9Y2W3 748 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 NME7Q9Y5B8 376 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 PLXNB2O15031 1838 aa14.87□□□□□ -0.03
TRAF3-202ENST00000351691 DCLK1O15075 740 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 CCDC159P0C7I6 412 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 IMPDH1P20839 514 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 NR4A1P22736 598 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 IL12AP29459 219 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 HOXA11P31270 313 aaPredicted RBP14.86□□□□□ -0.03
TRAF3-202ENST00000351691 CHRNEQ04844 493 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 UGT3A2Q3SY77 523 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 VPS26BQ4G0F5 336 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 INTS6LQ5JSJ4 861 aaKnown RBP14.86□□□□□ -0.03
TRAF3-202ENST00000351691 NAPEPLDQ6IQ20 393 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 NOTUMQ6P988 496 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 USP43Q70EL4 1123 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 FAM35AQ86V20 835 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 LYSMD2Q8IV50 215 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 MFSD6LQ8IWD5 586 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 CLYBLQ8N0X4 340 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 SVOPQ8N4V2 548 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 ZNF555Q8NEP9 628 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 TP53INP1Q96A56 240 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 BTBD2Q9BX70 525 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 AKTIPQ9H8T0 292 aa14.86□□□□□ -0.03
TRAF3-202ENST00000351691 SPC25Q9HBM1 224 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms