RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 FAM180AQ6UWF9 173 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 PRRT2Q7Z6L0 340 aaPredicted RBP15.95■□□□□ 0.14
PTPN11-201ENST00000351677 COLGALT2Q8IYK4 626 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 NLGN2Q8NFZ4 835 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 MCRS1Q96EZ8 462 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 CADM1Q9BY67 442 aaKnown RBP15.95■□□□□ 0.14
PTPN11-201ENST00000351677 RHOBTB2Q9BYZ6 727 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 NMUR1Q9HB89 426 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 LRTM1Q9HBL6 345 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 COMMD3-BMI1R4GMX3 469 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 STBD1O95210 358 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 ATP12AP54707 1039 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 GNA12Q03113 381 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 CLCQ05315 142 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 SOWAHAQ2M3V2 549 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 DEFB115Q30KQ5 88 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 TSTD2Q5T7W7 516 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 DEF8Q6ZN54 512 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 FSTL5Q8N475 847 aaPredicted RBP15.95■□□□□ 0.14
PTPN11-201ENST00000351677 ZBTB2Q8N680 514 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 MYDGFQ969H8 173 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 PPCDCQ96CD2 204 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 AK5Q9Y6K8 562 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 ISM1B1AKI9 464 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 SUV39H1O43463 412 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 RPL3P39023 403 aaKnown RBP15.95■□□□□ 0.14
PTPN11-201ENST00000351677 GNPDA1P46926 289 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 HSPA7P48741 367 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 XIAPP98170 497 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 ACAP2Q15057 778 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 ZNF697Q5TEC3 545 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 GALNT5Q7Z7M9 940 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 COMMD2Q86X83 199 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 OR2T34Q8NGX1 318 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 OR2T3Q8NH03 318 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 PCDHB1Q9Y5F3 818 aa15.95■□□□□ 0.14
PTPN11-201ENST00000351677 SEC24AO95486 1093 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 RNF44Q7L0R7 432 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 TBC1D21Q8IYX1 336 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 PGAM4Q8N0Y7 254 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 SCAMP5Q8TAC9 235 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 SLC39A8Q9C0K1 460 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 SPATA2Q9UM82 520 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 ZNF536O15090 1300 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 FAM149AA5PLN7 773 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 SLC35G4P0C7Q5 338 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 SLC6A2P23975 617 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 JAG1P78504 1218 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 CROCCP3Q8IVE0 287 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 RTL3Q8N8U3 475 aaKnown RBP15.94■□□□□ 0.14
PTPN11-201ENST00000351677 CLP1Q92989 425 aaKnown RBP15.94■□□□□ 0.14
PTPN11-201ENST00000351677 IPPKQ9H8X2 491 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 ZSCAN32Q9NX65 697 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 CD84Q9UIB8 345 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 GNEQ9Y223 722 aaKnown RBP15.94■□□□□ 0.14
PTPN11-201ENST00000351677 TP73O15350 636 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 DUSP11O75319 330 aaKnown RBP15.94■□□□□ 0.14
PTPN11-201ENST00000351677 F7P08709 466 aaPredicted RBP15.94■□□□□ 0.14
PTPN11-201ENST00000351677 CCNA2P20248 432 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 MTHFRP42898 656 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 YBEYP58557 167 aaPredicted RBP15.94■□□□□ 0.14
PTPN11-201ENST00000351677 SMARCB1Q12824 385 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 TRIM40Q6P9F5 258 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 NIPA2Q8N8Q9 360 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 ADCY4Q8NFM4 1077 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 KCTD5Q9NXV2 234 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 GSTK1Q9Y2Q3 226 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 ARIH1Q9Y4X5 557 aaPredicted RBP15.94■□□□□ 0.14
PTPN11-201ENST00000351677 ACSL4O60488 711 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 TRBC1P01850 177 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 IFNA16P05015 189 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 SELPP16109 830 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 DPYSQ14117 519 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 KHDRBS2Q5VWX1 349 aaKnown RBP15.94■□□□□ 0.14
PTPN11-201ENST00000351677 PAOXQ6QHF9 649 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 R3HCC1LQ7Z5L2 792 aaKnown RBP15.94■□□□□ 0.14
PTPN11-201ENST00000351677 ABCB10Q9NRK6 738 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 ROBO1Q9Y6N7 1651 aa15.94■□□□□ 0.14
PTPN11-201ENST00000351677 CARNS1A5YM72 827 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 C9IYK1 514 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 GRIA1P42261 906 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 GJA9P57773 515 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 IRF9Q00978 393 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 SLC20A2Q08357 652 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 ZSWIM7Q19AV6 140 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 ANXA8L1Q5VT79 327 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 RNF220Q5VTB9 566 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 IL23RQ5VWK5 629 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 SYPL2Q5VXT5 272 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 TMPRSS11BQ86T26 416 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 NAT8LQ8N9F0 302 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 FAM156AQ8NDB6 213 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 FADS3Q9Y5Q0 445 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 COL1A1P02452 1464 aaPredicted RBP15.93■□□□□ 0.14
PTPN11-201ENST00000351677 GRM6O15303 877 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 BUD31P41223 144 aaPredicted RBP15.93■□□□□ 0.14
PTPN11-201ENST00000351677 ZNF280AP59817 542 aaPredicted RBP15.93■□□□□ 0.14
PTPN11-201ENST00000351677 CACNG1Q06432 222 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 DDI2Q5TDH0 399 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 METTL21CQ5VZV1 264 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms