RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 BMP10O95393 424 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 C8GP07360 202 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 SNRPB2P08579 225 aaKnown RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 TFE3P19532 575 aaPredicted RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 HTR1BP28222 390 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 HSPA14Q0VDF9 509 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 LAYNQ6UX15 382 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 RAVER1Q8IY67 606 aaKnown RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 OR2AP1Q8NGE2 309 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 TRPC4APQ8TEL6 797 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 R3HDMLQ9H3Y0 253 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 SUV39H2Q9H5I1 410 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 SEMA4BQ9NPR2 832 aaPredicted RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 LEF1Q9UJU2 399 aaPredicted RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 CLCA2Q9UQC9 943 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 FCF1Q9Y324 198 aaKnown RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 MTF2Q9Y483 593 aaPredicted RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 TRAF6Q9Y4K3 522 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 PDZK1P1A8MUH7 402 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 ADAM17P78536 824 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 KPNB1Q14974 876 aaKnown RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 SLC14A2Q15849 920 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 GPRIN1Q7Z2K8 1008 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 DACH2Q96NX9 599 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 TRIM8Q9BZR9 551 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 OSGEPL1Q9H4B0 414 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 EURLQ9NYK6 297 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 PRR23AA6NEV1 266 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 COCHO43405 550 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 ULK1O75385 1050 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 SLC25A14O95258 325 aaPredicted RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 CCNDBP1O95273 360 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 PRAMEF1O95521 474 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 COX4I1P13073 169 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 MAGEA6P43360 314 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 NUMBP49757 651 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 DSC1Q08554 894 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 CYTH1Q15438 398 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 TAZQ16635 292 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 CUZD1Q86UP6 607 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 IFNEQ86WN2 208 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 SLC39A11Q8N1S5 342 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 TMEM132CQ8N3T6 1108 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 CLP1Q92989 425 aaKnown RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 MED8Q96G25 268 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 ATAD3AQ9NVI7 634 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 PCDHGC4Q9Y5F7 938 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 GNG14A0A1W2PPG7 69 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 CACNB4O00305 520 aaPredicted RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 RASSF9O75901 435 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 FAM155BO75949 473 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 ADARP55265 1226 aaKnown RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 MPP1Q00013 466 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 ACSM2AQ08AH3 577 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 SIRPB2Q5JXA9 342 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 ACSM2BQ68CK6 577 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 PIGWQ7Z7B1 504 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 CHPFQ8IZ52 775 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 PAAF1Q9BRP4 392 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 CAB39LQ9H9S4 337 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 IL1RAPL1Q9NZN1 696 aa12.1□□□□□ -0.47
SMAD9-201ENST00000350148 STX18Q9P2W9 335 aaKnown RBP12.1□□□□□ -0.47
SMAD9-201ENST00000350148 HGFP14210 728 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 PRIM2P49643 509 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 THOP1P52888 689 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 CEP78Q5JTW2 689 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 RTP2Q5QGT7 225 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 STEAP4Q687X5 459 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 LINGO4Q6UY18 593 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 TAGAPQ8N103 731 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 SELENOMQ8WWX9 145 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 IMP4Q96G21 291 aaKnown RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 LRIG1Q96JA1 1093 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 GPR22Q99680 433 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 UNKQ9C0B0 810 aaKnown RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 GKN1Q9NS71 199 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 ABCB8Q9NUT2 735 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 KCNE2Q9Y6J6 123 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 CSF2RAP15509 400 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 SLC1A2P43004 574 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 HPCAP84074 193 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 SULT1C3Q6IMI6 304 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 RRM2BQ7LG56 351 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 ZNF598Q86UK7 904 aaKnown RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 POF1BQ8WVV4 589 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 NXNL1Q96CM4 212 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 TRMT2BQ96GJ1 504 aaKnown RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 GAS2L1Q99501 681 aaPredicted RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 KCTD14Q9BQ13 255 aaPredicted RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 MRPS26Q9BYN8 205 aaKnown RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 OSBPL6Q9BZF3 934 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 PLK2Q9NYY3 685 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 WFS1O76024 890 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 MCCD1P59942 119 aaPredicted RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 ROR2Q01974 943 aaKnown RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 TRMT10BQ6PF06 316 aaKnown RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 CCDC103Q8IW40 242 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 OR52K2Q8NGK3 314 aa12.09□□□□□ -0.47
SMAD9-201ENST00000350148 FAM120BQ96EK7 910 aaKnown RBP12.09□□□□□ -0.47
SMAD9-201ENST00000350148 PSKH2Q96QS6 385 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms