RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CRHR1P34998 444 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 PLGLB1Q02325 96 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 BLMHQ13867 455 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 LCLAT1Q6UWP7 414 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 GPR141Q7Z602 305 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 AMIGO2Q86SJ2 522 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 SIX5Q8N196 739 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 WDR60Q8WVS4 1066 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 LCN9Q8WX39 176 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 EMID1Q96A84 441 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-202ENST00000346436 MFSD3Q96ES6 412 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 ROGDIQ9GZN7 287 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 PDZD7Q9H5P4 517 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 ZC4H2Q9NQZ6 224 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 TMPRSS4Q9NRS4 437 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 PLK2Q9NYY3 685 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 CDH7Q9ULB5 785 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 YIPF1Q9Y548 306 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 MYH11P35749 1972 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 IRAK2O43187 625 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 PIRTP0C851 137 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 TSHRP16473 764 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 HNF1BP35680 557 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 FOLH1Q04609 750 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 DLG2Q15700 870 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 PCID2Q5JVF3 399 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 GPR152Q8TDT2 470 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 LENG1Q96BZ8 264 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-202ENST00000346436 OTUB2Q96DC9 234 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 BTBD9Q96Q07 612 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 SCN3BQ9NY72 215 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 AP3M1Q9Y2T2 418 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 N4BP2Q86UW6 1770 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-202ENST00000346436 TMEM265A0A087WTH1 108 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 C2CD4BA6NLJ0 364 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 NRP1O14786 923 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 OLIG2Q13516 323 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 STXBP5Q5T5C0 1151 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 P4HA3Q7Z4N8 544 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 PEX5LQ8IYB4 626 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 CAPSLQ8WWF8 208 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 HLA-CQ95604 372 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 MINDY3Q9H8M7 445 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 TMEM216Q9P0N5 145 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 C19orf25Q9UFG5 118 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-202ENST00000346436 CROTQ9UKG9 612 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 BIRC5O15392 142 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 CCDC166P0CW27 439 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 PIK3R1P27986 724 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 HSPA13P48723 471 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 CDK7P50613 346 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 CHN2P52757 468 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 MBTD1Q05BQ5 628 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 AMZ1Q400G9 498 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 MINDY4Q4G0A6 757 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 EMC10Q5UCC4 262 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 PRSS55Q6UWB4 352 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-202ENST00000346436 SLC39A5Q6ZMH5 540 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 CCDC81Q6ZN84 652 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 FAR1Q8WVX9 515 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 SLC22A18Q96BI1 424 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 FAM120BQ96EK7 910 aaKnown RBP10.84□□□□□ -0.67
CLCN6-202ENST00000346436 IL22Q9GZX6 179 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 ITM2AO43736 263 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 TSPAN1O60635 241 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 ALBP02768 609 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 LMO2P25791 158 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 MATKP42679 507 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 MAPKAPK2P49137 400 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 OC90Q02509 493 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-202ENST00000346436 RUNX1T1Q06455 604 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 CDK18Q07002 472 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 ZNF460Q14592 562 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 VN1R5Q7Z5H4 357 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 DHFR2Q86XF0 187 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 SYT12Q8IV01 421 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 CRYGNQ8WXF5 182 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 PRICKLE1Q96MT3 831 aaPredicted RBP10.84□□□□□ -0.67
CLCN6-202ENST00000346436 AGAP2Q99490 1192 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 SLC4A5Q9BY07 1137 aa10.84□□□□□ -0.67
CLCN6-202ENST00000346436 EDDM13A0A1B0GTR0 161 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 TBX10O75333 385 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 TCEA3O75764 348 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 NOVP48745 357 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 SLC5A3P53794 718 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 PSMD4P55036 377 aaKnown RBP10.83□□□□□ -0.68
CLCN6-202ENST00000346436 ATXN7L2Q5T6C5 722 aaPredicted RBP10.83□□□□□ -0.68
CLCN6-202ENST00000346436 CAPN13Q6MZZ7 669 aaPredicted RBP10.83□□□□□ -0.68
CLCN6-202ENST00000346436 SCIMPQ6UWF3 145 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 APLFQ8IW19 511 aaPredicted RBP10.83□□□□□ -0.68
CLCN6-202ENST00000346436 AHI1Q8N157 1196 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 IL22RA1Q8N6P7 574 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 METTL6Q8TCB7 284 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 TRAPPC9Q96Q05 1148 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 EPB41L4BQ9H329 900 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 C2P06681 752 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 ALPIP09923 528 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 FAM45BPQ6NSW5 357 aa10.83□□□□□ -0.68
CLCN6-202ENST00000346436 DRICH1Q6PGQ1 229 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms