RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 KIAA1328Q86T90 577 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 SPACA3Q8IXA5 215 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 GPR26Q8NDV2 337 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 PATE1Q8WXA2 126 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 HTR3CQ8WXA8 447 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 OXNAD1Q96HP4 312 aaPredicted RBP14.33□□□□□ -0.12
HMGN3-202ENST00000344726 NAF1Q96HR8 494 aaKnown RBP14.33□□□□□ -0.12
HMGN3-202ENST00000344726 CALR3Q96L12 384 aaKnown RBP14.33□□□□□ -0.12
HMGN3-202ENST00000344726 ZNF578Q96N58 590 aaPredicted RBP14.33□□□□□ -0.12
HMGN3-202ENST00000344726 FOXP3Q9BZS1 431 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 DPEP2Q9H4A9 486 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 FAM83DQ9H4H8 585 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 PRORYQ9H606 182 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 ZFYVE1Q9HBF4 777 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 PKD2L2Q9NZM6 624 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 TAAR2Q9P1P5 351 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 IMPACTQ9P2X3 320 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 ATXN7L1Q9ULK2 861 aaPredicted RBP14.33□□□□□ -0.12
HMGN3-202ENST00000344726 ZNF711Q9Y462 761 aa14.33□□□□□ -0.12
HMGN3-202ENST00000344726 ZNF106Q9H2Y7 1883 aaKnown RBP14.32□□□□□ -0.12
HMGN3-202ENST00000344726 LOC285095A0A1B0GVY8 99 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 MACROD2A1Z1Q3 448 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 CCDC66A2RUB6 948 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 HACD1B0YJ81 288 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 DNAJC6O75061 913 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 NDST3O95803 873 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 PYGLP06737 847 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 PYGMP11217 842 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 RBL1P28749 1068 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 PTPN7P35236 360 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 OTUD4Q01804 1114 aaKnown RBP14.32□□□□□ -0.12
HMGN3-202ENST00000344726 ILF3Q12906 894 aaKnown RBP eCLIP14.32□□□□□ -0.12
HMGN3-202ENST00000344726 PYCR3Q53H96 274 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 SLC30A9Q6PML9 568 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 IGF2-ASQ6U949 168 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 C17orf82Q86X59 251 aaPredicted RBP14.32□□□□□ -0.12
HMGN3-202ENST00000344726 Q8N9G6 341 aaPredicted RBP14.32□□□□□ -0.12
HMGN3-202ENST00000344726 ACTL9Q8TC94 416 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 CCHCR1Q8TD31 782 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 MRGPRX2Q96LB1 330 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 SLC46A1Q96NT5 459 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 FAM118BQ9BPY3 351 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 GORASP1Q9BQQ3 440 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 GSDMCQ9BYG8 508 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 OSBPL8Q9BZF1 889 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 LRRN3Q9H3W5 708 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 MAGEE1Q9HCI5 957 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 KLHL8Q9P2G9 620 aaPredicted RBP14.32□□□□□ -0.12
HMGN3-202ENST00000344726 FAM153AQ9UHL3 310 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 APPL1Q9UKG1 709 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 PACSIN2Q9UNF0 486 aaPredicted RBP14.32□□□□□ -0.12
HMGN3-202ENST00000344726 EFR3BQ9Y2G0 817 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 AHCTF1Q8WYP5 2266 aa14.32□□□□□ -0.12
HMGN3-202ENST00000344726 RGSL1A5PLK6 1076 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 CDRT15L2A8MXV6 281 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 RRP8O43159 456 aaKnown RBP14.31□□□□□ -0.12
HMGN3-202ENST00000344726 MTSS1O43312 755 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 SLC4A1P02730 911 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 GLB1P16278 677 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 CHRNA4P43681 627 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 WNT3AP56704 352 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 RWDD2BP57060 319 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 PCBP4P57723 403 aaKnown RBP14.31□□□□□ -0.12
HMGN3-202ENST00000344726 ERVPABLB-1P60509 514 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 XRCC4Q13426 336 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 ALS2CLQ60I27 953 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 FOXR1Q6PIV2 292 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 LRRC69Q6ZNQ3 347 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 PID1Q7Z2X4 250 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 SPRED1Q7Z699 444 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 CCNJLQ8IV13 435 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 LSMEM2Q8N112 164 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 NAGSQ8N159 534 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 ZNF248Q8NDW4 579 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 OR6C4Q8NGE1 309 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 WDR48Q8TAF3 677 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 ZDHHC1Q8WTX9 485 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 OR2M4Q96R27 311 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 FCRL5Q96RD9 977 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 GFM1Q96RP9 751 aaKnown RBP14.31□□□□□ -0.12
HMGN3-202ENST00000344726 ARFGAP3Q9NP61 516 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 LRIT1Q9P2V4 623 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 PRKAB1Q9Y478 270 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 PCDHGA8Q9Y5G5 932 aa14.31□□□□□ -0.12
HMGN3-202ENST00000344726 ATMQ13315 3056 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 ATRXP46100 2492 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 CCDC187A0A096LP49 1063 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 H7C0C1 242 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 DDX3YO15523 660 aaKnown RBP14.3□□□□□ -0.12
HMGN3-202ENST00000344726 NUDT21O43809 227 aaKnown RBP14.3□□□□□ -0.12
HMGN3-202ENST00000344726 ASMTLO95671 621 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 ECEL1O95672 775 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 HGFP14210 728 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 BPIP17213 487 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 ACTR1BP42025 376 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 ATP5OP48047 213 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 DCDC1P59894 354 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 ACTR1AP61163 376 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 B4GALNT1Q00973 533 aa14.3□□□□□ -0.12
HMGN3-202ENST00000344726 SIRPB2Q5JXA9 342 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms