RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 ADAMTSL4Q6UY14 1074 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 B4GALNT4Q76KP1 1039 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 NRROSQ86YC3 692 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 GALNT13Q8IUC8 556 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 CNGA4Q8IV77 575 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 NRSN1Q8IZ57 195 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 ARRDC2Q8TBH0 407 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 PTCD2Q8WV60 388 aaKnown RBP12.34□□□□□ -0.43
SGCA-202ENST00000344627 COL26A1Q96A83 441 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 TAAR9Q96RI9 348 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 EFHD1Q9BUP0 239 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 DDA1Q9BW61 102 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 ADGRE3Q9BY15 652 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 ASPSCR1Q9BZE9 553 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 ZMYND15Q9H091 742 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 STARD5Q9NSY2 213 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 SLC17A4Q9Y2C5 497 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 PLEKHM1Q9Y4G2 1056 aa12.34□□□□□ -0.43
SGCA-202ENST00000344627 ASH1LQ9NR48 2969 aaKnown RBP12.33□□□□□ -0.43
SGCA-202ENST00000344627 ATMQ13315 3056 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 PRLP01236 227 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 MAGEA1P43355 309 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 RPL26P61254 145 aaKnown RBP12.33□□□□□ -0.44
SGCA-202ENST00000344627 PPIDQ08752 370 aaKnown RBP12.33□□□□□ -0.44
SGCA-202ENST00000344627 LRP8Q14114 963 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 LLGL1Q15334 1064 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 PCSK7Q16549 785 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 QPCTQ16769 361 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 KAZNQ674X7 775 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 ALG1LQ6GMV1 187 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 ATG14Q6ZNE5 492 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 ZNF765Q7L2R6 523 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 NT5DC3Q86UY8 548 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 RHOT1Q8IXI2 618 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 PLD5Q8N7P1 536 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 AVL9Q8NBF6 648 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 AGBL5Q8NDL9 886 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 OR4D9Q8NGE8 314 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 EXD1Q8NHP7 514 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 PATE1Q8WXA2 126 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 SCARF2Q96GP6 870 aaPredicted RBP12.33□□□□□ -0.44
SGCA-202ENST00000344627 CATSPER2Q96P56 530 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 TEFMQ96QE5 360 aaKnown RBP12.33□□□□□ -0.44
SGCA-202ENST00000344627 OR2M4Q96R27 311 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 AGAP2Q99490 1192 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 ZPBPQ9BS86 351 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 TRIM5Q9C035 493 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 SEMA4CQ9C0C4 833 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 FAM83DQ9H4H8 585 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 RDH14Q9HBH5 336 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 DDX56Q9NY93 547 aaKnown RBP12.33□□□□□ -0.44
SGCA-202ENST00000344627 PKD2L2Q9NZM6 624 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 TUBD1Q9UJT1 453 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 RPL26L1Q9UNX3 145 aaKnown RBP12.33□□□□□ -0.44
SGCA-202ENST00000344627 PRKAB1Q9Y478 270 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 ZNF462Q96JM2 2506 aa12.33□□□□□ -0.44
SGCA-202ENST00000344627 PRAMEF33A0A0G2JMD5 474 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 ANKRD66B4E2M5 251 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 B4GAT1O43505 415 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 PRAMEF10O60809 474 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 PPFIA2O75334 1257 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 ATP1A1P05023 1023 aaKnown RBP12.32□□□□□ -0.44
SGCA-202ENST00000344627 PIRTP0C851 137 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 SLC2A4P14672 509 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 COMTP21964 271 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 SLC1A1P43005 524 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 SPINT3P49223 89 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 LIMK2P53671 638 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 MAPK10P53779 464 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 IFI35P80217 286 aaPredicted RBP12.32□□□□□ -0.44
SGCA-202ENST00000344627 ZBTB17Q13105 803 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 CCDC70Q6NSX1 233 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 USP7Q93009 1102 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 SH3KBP1Q96B97 665 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 EPB41L1Q9H4G0 881 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 STN1Q9H668 368 aaKnown RBP12.32□□□□□ -0.44
SGCA-202ENST00000344627 SHOC2Q9UQ13 582 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 PCDHGA4Q9Y5G9 962 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 COL6A6A6NMZ7 2263 aa12.32□□□□□ -0.44
SGCA-202ENST00000344627 AHCTF1Q8WYP5 2266 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 SCN8AQ9UQD0 1980 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 CFAP46Q8IYW2 2715 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 C3orf70A6NLC5 250 aaPredicted RBP12.31□□□□□ -0.44
SGCA-202ENST00000344627 ZNF487B1APH4 448 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 B4E171 279 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 C9orf172C9J069 976 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 SNX2O60749 519 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 MTA2O94776 668 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 SOD1P00441 154 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 MMP2P08253 660 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 ITIH1P19827 911 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 CSTF2P33240 577 aaKnown RBP eCLIP12.31□□□□□ -0.44
SGCA-202ENST00000344627 TSPAN7P41732 249 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 TNNT3P45378 269 aaPredicted RBP12.31□□□□□ -0.44
SGCA-202ENST00000344627 FASLGP48023 281 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 TFDP2Q14188 446 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 LINC00303Q3SY05 128 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 PYCR3Q53H96 274 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 LRRC38Q5VT99 294 aa12.31□□□□□ -0.44
SGCA-202ENST00000344627 NKAIN2Q5VXU1 208 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms