RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 BRWD1Q9NSI6 2320 aa14.63□□□□□ -0.07
RET-201ENST00000340058 COL16A1Q07092 1604 aaPredicted RBP14.63□□□□□ -0.07
RET-201ENST00000340058 EIF2S1P05198 315 aaKnown RBP14.63□□□□□ -0.07
RET-201ENST00000340058 CRATP43155 626 aa14.63□□□□□ -0.07
RET-201ENST00000340058 DGCR6Q14129 220 aa14.63□□□□□ -0.07
RET-201ENST00000340058 ADGRF1Q5T601 910 aa14.63□□□□□ -0.07
RET-201ENST00000340058 LYSMD3Q7Z3D4 306 aa14.63□□□□□ -0.07
RET-201ENST00000340058 GPR141Q7Z602 305 aa14.63□□□□□ -0.07
RET-201ENST00000340058 ADCK1Q86TW2 530 aa14.63□□□□□ -0.07
RET-201ENST00000340058 RDH11Q8TC12 318 aa14.63□□□□□ -0.07
RET-201ENST00000340058 OR52E6Q96RD3 313 aa14.63□□□□□ -0.07
RET-201ENST00000340058 BDH2Q9BUT1 245 aa14.63□□□□□ -0.07
RET-201ENST00000340058 OSBPL2Q9H1P3 480 aa14.63□□□□□ -0.07
RET-201ENST00000340058 ARMC7Q9H6L4 198 aa14.63□□□□□ -0.07
RET-201ENST00000340058 ACTL7AQ9Y615 435 aa14.63□□□□□ -0.07
RET-201ENST00000340058 TRIM38O00635 465 aa14.63□□□□□ -0.07
RET-201ENST00000340058 OTCP00480 354 aa14.63□□□□□ -0.07
RET-201ENST00000340058 FGBP02675 491 aa14.63□□□□□ -0.07
RET-201ENST00000340058 GRK3P35626 688 aa14.63□□□□□ -0.07
RET-201ENST00000340058 PAFAH1B3Q15102 231 aaKnown RBP14.63□□□□□ -0.07
RET-201ENST00000340058 ZDHHC13Q8IUH4 622 aa14.63□□□□□ -0.07
RET-201ENST00000340058 DHRSXQ8N5I4 330 aa14.63□□□□□ -0.07
RET-201ENST00000340058 SH3RF2Q8TEC5 729 aa14.63□□□□□ -0.07
RET-201ENST00000340058 RMND5BQ96G75 393 aaPredicted RBP14.63□□□□□ -0.07
RET-201ENST00000340058 PRR11Q96HE9 360 aaPredicted RBP14.63□□□□□ -0.07
RET-201ENST00000340058 MAGEB10Q96LZ2 347 aaPredicted RBP14.63□□□□□ -0.07
RET-201ENST00000340058 ASB2Q96Q27 587 aa14.63□□□□□ -0.07
RET-201ENST00000340058 NR1H4Q96RI1 486 aaPredicted RBP14.63□□□□□ -0.07
RET-201ENST00000340058 ZCCHC2Q9C0B9 1178 aaKnown RBP14.63□□□□□ -0.07
RET-201ENST00000340058 PSMD13Q9UNM6 376 aa14.63□□□□□ -0.07
RET-201ENST00000340058 TIAM2Q8IVF5 1701 aa14.62□□□□□ -0.07
RET-201ENST00000340058 RFPL1O75677 317 aa14.62□□□□□ -0.07
RET-201ENST00000340058 PAX3P23760 479 aa14.62□□□□□ -0.07
RET-201ENST00000340058 RANBP1P43487 201 aa14.62□□□□□ -0.07
RET-201ENST00000340058 CCDC15Q0P6D6 951 aa14.62□□□□□ -0.07
RET-201ENST00000340058 UBXN11Q5T124 520 aa14.62□□□□□ -0.07
RET-201ENST00000340058 KIAA0930Q6ICG6 404 aaPredicted RBP14.62□□□□□ -0.07
RET-201ENST00000340058 TRNP1Q6NT89 227 aa14.62□□□□□ -0.07
RET-201ENST00000340058 CHST9Q7L1S5 443 aa14.62□□□□□ -0.07
RET-201ENST00000340058 CLVS1Q8IUQ0 354 aaPredicted RBP14.62□□□□□ -0.07
RET-201ENST00000340058 IGSF8Q969P0 613 aa14.62□□□□□ -0.07
RET-201ENST00000340058 DGCR6LQ9BY27 220 aa14.62□□□□□ -0.07
RET-201ENST00000340058 SMOC2Q9H3U7 446 aa14.62□□□□□ -0.07
RET-201ENST00000340058 GALPQ9UBC7 116 aa14.62□□□□□ -0.07
RET-201ENST00000340058 SLC22A3O75751 556 aa14.62□□□□□ -0.07
RET-201ENST00000340058 NCK1P16333 377 aa14.62□□□□□ -0.07
RET-201ENST00000340058 GDF5P43026 501 aa14.62□□□□□ -0.07
RET-201ENST00000340058 USP46P62068 366 aa14.62□□□□□ -0.07
RET-201ENST00000340058 PLEKHG4Q58EX7 1191 aa14.62□□□□□ -0.07
RET-201ENST00000340058 ZNF276Q8N554 614 aa14.62□□□□□ -0.07
RET-201ENST00000340058 OR9Q1Q8NGQ5 310 aa14.62□□□□□ -0.07
RET-201ENST00000340058 CYB5D2Q8WUJ1 264 aa14.62□□□□□ -0.07
RET-201ENST00000340058 FBRSL1Q9HCM7 1045 aaKnown RBP14.62□□□□□ -0.07
RET-201ENST00000340058 EIF2B3Q9NR50 452 aaKnown RBP14.62□□□□□ -0.07
RET-201ENST00000340058 GIMAP4Q9NUV9 329 aa14.62□□□□□ -0.07
RET-201ENST00000340058 MYH7BA7E2Y1 1941 aa14.62□□□□□ -0.07
RET-201ENST00000340058 CDC7O00311 574 aa14.62□□□□□ -0.07
RET-201ENST00000340058 SLC7A4O43246 635 aa14.62□□□□□ -0.07
RET-201ENST00000340058 TYROBPO43914 113 aa14.62□□□□□ -0.07
RET-201ENST00000340058 CNTN1Q12860 1018 aa14.62□□□□□ -0.07
RET-201ENST00000340058 TCEAL1Q15170 157 aa14.62□□□□□ -0.07
RET-201ENST00000340058 MPPE1Q53F39 396 aa14.62□□□□□ -0.07
RET-201ENST00000340058 FGD3Q5JSP0 725 aa14.62□□□□□ -0.07
RET-201ENST00000340058 RTP2Q5QGT7 225 aa14.62□□□□□ -0.07
RET-201ENST00000340058 NAIF1Q69YI7 327 aaPredicted RBP14.62□□□□□ -0.07
RET-201ENST00000340058 TNIP2Q8NFZ5 429 aa14.62□□□□□ -0.07
RET-201ENST00000340058 WDR60Q8WVS4 1066 aa14.62□□□□□ -0.07
RET-201ENST00000340058 FAM124BQ9H5Z6 455 aaPredicted RBP14.62□□□□□ -0.07
RET-201ENST00000340058 ZDHHC4Q9NPG8 344 aa14.62□□□□□ -0.07
RET-201ENST00000340058 PCDH10Q9P2E7 1040 aa14.62□□□□□ -0.07
RET-201ENST00000340058 DEC1Q9P2X7 70 aa14.62□□□□□ -0.07
RET-201ENST00000340058 SLC7A8Q9UHI5 535 aa14.62□□□□□ -0.07
RET-201ENST00000340058 ZDHHC2Q9UIJ5 367 aa14.62□□□□□ -0.07
RET-201ENST00000340058 LEF1Q9UJU2 399 aaPredicted RBP14.62□□□□□ -0.07
RET-201ENST00000340058 ZNF229Q9UJW7 825 aa14.62□□□□□ -0.07
RET-201ENST00000340058 Q9Y3F1 56 aa14.62□□□□□ -0.07
RET-201ENST00000340058 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.61□□□□□ -0.07
RET-201ENST00000340058 TGDSO95455 350 aa14.61□□□□□ -0.07
RET-201ENST00000340058 ALDOAP04075 364 aaKnown RBP14.61□□□□□ -0.07
RET-201ENST00000340058 GALTP07902 379 aa14.61□□□□□ -0.07
RET-201ENST00000340058 PFKMP08237 780 aa14.61□□□□□ -0.07
RET-201ENST00000340058 PSMB9P28065 219 aa14.61□□□□□ -0.07
RET-201ENST00000340058 PEX2P28328 305 aa14.61□□□□□ -0.07
RET-201ENST00000340058 IDH2P48735 452 aaKnown RBP14.61□□□□□ -0.07
RET-201ENST00000340058 FBXW4P57775 412 aa14.61□□□□□ -0.07
RET-201ENST00000340058 MSANTD2Q6P1R3 559 aa14.61□□□□□ -0.07
RET-201ENST00000340058 KIAA0408Q6ZU52 694 aa14.61□□□□□ -0.07
RET-201ENST00000340058 FEM1CQ96JP0 617 aa14.61□□□□□ -0.07
RET-201ENST00000340058 ZNF490Q9ULM2 529 aaPredicted RBP14.61□□□□□ -0.07
RET-201ENST00000340058 EPHX1P07099 455 aa14.61□□□□□ -0.07
RET-201ENST00000340058 SCNN1AP37088 669 aa14.61□□□□□ -0.07
RET-201ENST00000340058 MAPK8P45983 427 aa14.61□□□□□ -0.07
RET-201ENST00000340058 HSPA13P48723 471 aa14.61□□□□□ -0.07
RET-201ENST00000340058 POLD2P49005 469 aa14.61□□□□□ -0.07
RET-201ENST00000340058 RPIAP49247 311 aa14.61□□□□□ -0.07
RET-201ENST00000340058 CASP9P55211 416 aa14.61□□□□□ -0.07
RET-201ENST00000340058 HMGCS1Q01581 520 aa14.61□□□□□ -0.07
RET-201ENST00000340058 GHRHRQ02643 423 aa14.61□□□□□ -0.07
RET-201ENST00000340058 ZCCHC8Q6NZY4 707 aaKnown RBP14.61□□□□□ -0.07
RET-201ENST00000340058 ZFP1Q6P2D0 407 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms