RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 KRT33BQ14525 404 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 HIST2H2ACQ16777 129 aaPredicted RBP12.59□□□□□ -0.39
BRPF3-201ENST00000339717 SLFN11Q7Z7L1 901 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 METTL23Q86XA0 190 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 ZNF671Q8TAW3 534 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 C7orf43Q8WVR3 580 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 MRPL48Q96GC5 212 aaKnown RBP12.59□□□□□ -0.39
BRPF3-201ENST00000339717 FAM49AQ9H0Q0 323 aaPredicted RBP12.59□□□□□ -0.39
BRPF3-201ENST00000339717 TIGARQ9NQ88 270 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 XPNPEP3Q9NQH7 507 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 SALL4Q9UJQ4 1053 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 OAZ3Q9UMX2 235 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 TO15178 435 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 LIASO43766 372 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 KCNJ13O60928 360 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 IFNA17P01571 189 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 ADORA1P30542 326 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 MAGEA12P43365 314 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 SNRPFP62306 86 aaKnown RBP12.59□□□□□ -0.39
BRPF3-201ENST00000339717 HSPA14Q0VDF9 509 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 GPR68Q15743 365 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 AADACL2Q6P093 401 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 NXPE2Q96DL1 559 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 RNF6Q9Y252 685 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 PCDHGB6Q9Y5F9 930 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 FAM86C2PA6NEL3 165 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 EPHB6O15197 1021 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 HOXC11O43248 304 aaPredicted RBP12.59□□□□□ -0.39
BRPF3-201ENST00000339717 CHMP24386 653 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 ACADLP28330 430 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 EIF2DP41214 584 aaKnown RBP12.59□□□□□ -0.39
BRPF3-201ENST00000339717 TARDBPQ13148 414 aaKnown RBP eCLIP12.59□□□□□ -0.39
BRPF3-201ENST00000339717 DSG2Q14126 1118 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 METTL3Q86U44 580 aaKnown RBP12.59□□□□□ -0.39
BRPF3-201ENST00000339717 ALG3Q92685 438 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 RBPMSQ93062 196 aaKnown RBP12.59□□□□□ -0.39
BRPF3-201ENST00000339717 LGALS12Q96DT0 336 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 SNX15Q9NRS6 342 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 SLC38A7Q9NVC3 462 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 ENPP5Q9UJA9 477 aa12.59□□□□□ -0.39
BRPF3-201ENST00000339717 AGO2Q9UKV8 859 aaKnown RBP12.59□□□□□ -0.39
BRPF3-201ENST00000339717 A0A0B4J269 797 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 BCLAF3A2AJT9 711 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 RSL1D1O76021 490 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 DLDP09622 509 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 CYP11B1P15538 503 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 UBA1P22314 1058 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 MATKP42679 507 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 TFAMQ00059 246 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 SREBF2Q12772 1141 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 CYP1B1Q16678 543 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 LIPMQ5VYY2 423 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 HGSNATQ68CP4 663 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 CYP4Z1Q86W10 505 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 SYNPOQ8N3V7 929 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 SLC47A1Q96FL8 570 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 COQ10AQ96MF6 247 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 HOXD1Q9GZZ0 328 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 REEP4Q9H6H4 257 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 NUFIP1Q9UHK0 495 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 USP21Q9UK80 565 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 TRHDEQ9UKU6 1024 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 CDH7Q9ULB5 785 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 MGAT4AQ9UM21 535 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 FOXO6A8MYZ6 492 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 HMGB3O15347 200 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 BCAS1O75363 584 aaPredicted RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 AP2A1O95782 977 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 LIMK2P53671 638 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 SPANXN3Q5MJ09 141 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 VARS2Q5ST30 1063 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 RNASEH2BQ5TBB1 312 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 KHDRBS2Q5VWX1 349 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 FAM117BQ6P1L5 589 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 ZNF438Q7Z4V0 828 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 R3HCC1LQ7Z5L2 792 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 SNIP1Q8TAD8 396 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 SAMD11Q96NU1 681 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 REEP2Q9BRK0 252 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 RNF121Q9H920 327 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 TCRBV9S1A1TA0A576 114 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 MEIOCA2RUB1 952 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 GUCA1CO95843 209 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 OR56A5P0C7T3 313 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 ALDH3B2P48448 385 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 TKTL1P51854 596 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 POU4F3Q15319 338 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 RNF212Q495C1 297 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 NANOGP8Q6NSW7 305 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 PAPD4Q6PIY7 484 aaKnown RBP12.58□□□□□ -0.4
BRPF3-201ENST00000339717 C16orf86Q6ZW13 317 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 KIAA0895Q8NCT3 520 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 OR6Q1Q8NGQ2 317 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 RHOXF1Q8NHV9 184 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 CNPPD1Q9BV87 410 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 BTBD2Q9BX70 525 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 IRAK3Q9Y616 596 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 A0A1B0GVI7 797 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 SUPT3HB4E1H0 165 aa12.58□□□□□ -0.4
BRPF3-201ENST00000339717 UBXN8O00124 270 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms