RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PTDSS1P48651 473 aaKnown RBP12.52□□□□□ -0.4
LIMK1-201ENST00000336180 SH3BP2P78314 561 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 NCEH1Q6PIU2 408 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 Q6ZVU0 165 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 PIWIL4Q7Z3Z4 852 aaKnown RBP12.52□□□□□ -0.4
LIMK1-201ENST00000336180 TMC8Q8IU68 726 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 TMEM199Q8N511 208 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 CHST14Q8NCH0 376 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 SLC26A7Q8TE54 656 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 SCG3Q8WXD2 468 aaKnown RBP12.52□□□□□ -0.4
LIMK1-201ENST00000336180 RANBP9Q96S59 729 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 ACOX2Q99424 681 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 AARSD1Q9BTE6 412 aaKnown RBP12.52□□□□□ -0.4
LIMK1-201ENST00000336180 FNIP2Q9P278 1114 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 COPG1Q9Y678 874 aaKnown RBP12.52□□□□□ -0.4
LIMK1-201ENST00000336180 PRSS21Q9Y6M0 314 aa12.52□□□□□ -0.4
LIMK1-201ENST00000336180 A0A088AWK7 358 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 TMEM114B3SHH9 223 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 E5RI56 91 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 LINC00032P0C843 101 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 CCND1P24385 295 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 EEF1DP29692 281 aaKnown RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 CLNS1AP54105 237 aaKnown RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 PFKPQ01813 784 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 UNC50Q53HI1 259 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 CTSL3PQ5NE16 218 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 GRASPQ7Z6J2 395 aaPredicted RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 SETD3Q86TU7 594 aaPredicted RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 C7orf61Q8IZ16 206 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 LPGAT1Q92604 370 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 LINGO1Q96FE5 620 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 MYO19Q96H55 970 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 NLE1Q9NVX2 485 aaPredicted RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 NOP53Q9NZM5 478 aaKnown RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 LSM7Q9UK45 103 aaKnown RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 PPM1HQ9ULR3 514 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 SDHDO14521 159 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 UGT2B4P06133 528 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 FDXRP22570 491 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 CES1P23141 567 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 GJA8P48165 433 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 PLIN5Q00G26 463 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 TBL3Q12788 808 aaKnown RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 RIPK1Q13546 671 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 SLC44A4Q53GD3 710 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 ZNF648Q5T619 568 aaPredicted RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 FAM45BPQ6NSW5 357 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 KIAA0408Q6ZU52 694 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 ACAD11Q709F0 780 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 FAM45AQ8TCE6 357 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 ALG14Q96F25 216 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 ZNF570Q96NI8 536 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 GSTO2Q9H4Y5 243 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 ASAH2Q9NR71 780 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 MBD1Q9UIS9 605 aaPredicted RBP12.52□□□□□ -0.41
LIMK1-201ENST00000336180 ZNF711Q9Y462 761 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 OR51B4Q9Y5P0 310 aa12.52□□□□□ -0.41
LIMK1-201ENST00000336180 ANAPC1Q9H1A4 1944 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 KATNA1O75449 491 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 ZNF189O75820 626 aaPredicted RBP12.51□□□□□ -0.41
LIMK1-201ENST00000336180 APOA4P06727 396 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 CTSAP10619 480 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 AOC1P19801 751 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 HNF1BP35680 557 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 MESP2Q0VG99 397 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 TSNAXIP1Q2TAA8 658 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 C5orf22Q49AR2 442 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 KLHDC10Q6PID8 442 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 MBOAT1Q6ZNC8 495 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 TSPAN17Q96FV3 270 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 PPP1R2P1Q96PQ5 205 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 BBS2Q9BXC9 721 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 WBP1LQ9NX94 342 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 ANKRD36A6QL64 1941 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 ECI2O75521 394 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 PAPSS2O95340 614 aaPredicted RBP12.51□□□□□ -0.41
LIMK1-201ENST00000336180 PRAMEF1O95521 474 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 FGBP02675 491 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 PRKAA2P54646 552 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 NAA25Q14CX7 972 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 TAF1AQ15573 450 aaPredicted RBP12.51□□□□□ -0.41
LIMK1-201ENST00000336180 NECAB2Q7Z6G3 386 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 TRMT2BQ96GJ1 504 aaKnown RBP12.51□□□□□ -0.41
LIMK1-201ENST00000336180 ZNF599Q96NL3 588 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 BIRC8Q96P09 236 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 ADGRE3Q9BY15 652 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 ASB8Q9H765 288 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 COMMD8Q9NX08 183 aa12.51□□□□□ -0.41
LIMK1-201ENST00000336180 GRM6O15303 877 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 LILRB3O75022 631 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 PSMG1O95456 288 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 GLUD1P00367 558 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 NAT2P11245 290 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 MTHFD2P13995 350 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 GDF5P43026 501 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 BCL2L1Q07817 233 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 TAF11Q15544 211 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 AGKQ53H12 422 aa12.5□□□□□ -0.41
LIMK1-201ENST00000336180 PAOXQ6QHF9 649 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms