RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 EID2BQ96D98 161 aa13.9□□□□□ -0.18
TRAIP-201ENST00000331456 ZNF641Q96N77 438 aaPredicted RBP13.9□□□□□ -0.18
TRAIP-201ENST00000331456 SLC2A11Q9BYW1 496 aa13.9□□□□□ -0.18
TRAIP-201ENST00000331456 LINC00597Q9H2U6 94 aa13.9□□□□□ -0.18
TRAIP-201ENST00000331456 SUV39H2Q9H5I1 410 aa13.9□□□□□ -0.18
TRAIP-201ENST00000331456 WDR55Q9H6Y2 383 aaPredicted RBP13.9□□□□□ -0.18
TRAIP-201ENST00000331456 PIDD1Q9HB75 910 aa13.9□□□□□ -0.18
TRAIP-201ENST00000331456 RNF112Q9ULX5 631 aa13.9□□□□□ -0.18
TRAIP-201ENST00000331456 MED16Q9Y2X0 877 aa13.9□□□□□ -0.18
TRAIP-201ENST00000331456 MRPS23Q9Y3D9 190 aaKnown RBP13.9□□□□□ -0.18
TRAIP-201ENST00000331456 MTF2Q9Y483 593 aaPredicted RBP13.9□□□□□ -0.18
TRAIP-201ENST00000331456 SUPT3HB4E1H0 165 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 PRMT5O14744 637 aaPredicted RBP13.89□□□□□ -0.19
TRAIP-201ENST00000331456 SLC22A2O15244 555 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 DCXO43602 365 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 SUPT3HO75486 399 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 CLDN7O95471 211 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 PRAMEF1O95521 474 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 GFAPP14136 432 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 CCND1P24385 295 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 EPHA3P29320 983 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 RECQLP46063 649 aaPredicted RBP13.89□□□□□ -0.19
TRAIP-201ENST00000331456 IL2P60568 153 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 NAA20P61599 178 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 SATB1Q01826 763 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 LSM12Q3MHD2 195 aaKnown RBP13.89□□□□□ -0.19
TRAIP-201ENST00000331456 LY6G5CQ5SRR4 150 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 NXNQ6DKJ4 435 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 CBARPQ8N350 705 aaPredicted RBP13.89□□□□□ -0.19
TRAIP-201ENST00000331456 RBM15BQ8NDT2 890 aaKnown RBP13.89□□□□□ -0.19
TRAIP-201ENST00000331456 PPP1R36Q96LQ0 422 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 LYSMD1Q96S90 227 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 ATOH8Q96SQ7 321 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 CLPBQ9H078 707 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 GSTO2Q9H4Y5 243 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 ZDHHC6Q9H6R6 413 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 MARK1Q9P0L2 795 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 TMCO1Q9UM00 188 aa13.89□□□□□ -0.19
TRAIP-201ENST00000331456 GLYATL1P3A0A0U1RQE8 302 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 H3BMM5 538 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 UBXN8O00124 270 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 PER2O15055 1255 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 MAGEC1O60732 1142 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 NIPSNAP2O75323 286 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 MYOGP15173 224 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 CEBPBP17676 345 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 POLR2EP19388 210 aaKnown RBP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 RPS3P23396 243 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 ADSLP30566 484 aaPredicted RBP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 SPAM1P38567 509 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 CCNHP51946 323 aaPredicted RBP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 KLF10Q13118 480 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 GPM6BQ13491 265 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 ZRSR2Q15696 482 aaKnown RBP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 CDKN3Q16667 212 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 GPR33Q49SQ1 333 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 SETMARQ53H47 684 aaPredicted RBP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 UNC50Q53HI1 259 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 TPRG1Q6ZUI0 275 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 SPRED2Q7Z698 418 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 SUGP1Q8IWZ8 645 aaKnown RBP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 RBFAQ8N0V3 343 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 AHI1Q8N157 1196 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 SIDT2Q8NBJ9 832 aaKnown RBP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 GRIN3AQ8TCU5 1115 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 ING5Q8WYH8 240 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 ECHDC3Q96DC8 303 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 ASIC4Q96FT7 647 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 ZSWIM3Q96MP5 696 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 MCOLN1Q9GZU1 580 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 P2RY12Q9H244 342 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 ASB8Q9H765 288 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 MRGBPQ9NV56 204 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 WNT6Q9Y6F9 365 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 ARHGEF15O94989 841 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 NNMTP40261 264 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 NFATC2Q13469 925 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 NAA25Q14CX7 972 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 PFKFB4Q16877 469 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 PTRHD1Q6GMV3 140 aaKnown RBP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 SERPINA9Q86WD7 417 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 PLPP6Q8IY26 295 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 ADGRG2Q8IZP9 1017 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 FBXO39Q8N4B4 442 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 CELF5Q8N6W0 485 aaKnown RBP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 CEP70Q8NHQ1 597 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 CD200R1Q8TD46 325 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 ZNF707Q96C28 371 aaPredicted RBP13.88□□□□□ -0.19
TRAIP-201ENST00000331456 SCRN2Q96FV2 425 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 CRLS1Q9UJA2 301 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 GNPTGQ9UJJ9 305 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 SLC8A2Q9UPR5 921 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 PPIL1Q9Y3C6 166 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 HCFC2Q9Y5Z7 792 aa13.88□□□□□ -0.19
TRAIP-201ENST00000331456 BTN3A1O00481 513 aa13.87□□□□□ -0.19
TRAIP-201ENST00000331456 CA3P07451 260 aa13.87□□□□□ -0.19
TRAIP-201ENST00000331456 COX4I1P13073 169 aa13.87□□□□□ -0.19
TRAIP-201ENST00000331456 BPIP17213 487 aa13.87□□□□□ -0.19
TRAIP-201ENST00000331456 POLR2LP62875 67 aaKnown RBP13.87□□□□□ -0.19
TRAIP-201ENST00000331456 TSNQ15631 228 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms