RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PMS2P54278 862 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 PRKAA2P54646 552 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 POU4F1Q01851 419 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 DMPKQ09013 629 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 ILF3Q12906 894 aaKnown RBP eCLIP5.14□□□□□ -1.59
LRIT3-201ENST00000327908 GALNT3Q14435 633 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 CRYMQ14894 314 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 DBN1Q16643 649 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 ZNF423Q2M1K9 1284 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 TSNAXIP1Q2TAA8 658 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 PLEKHS1Q5SXH7 462 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 DENND5AQ6IQ26 1287 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 CCNI2Q6ZMN8 369 aaPredicted RBP5.14□□□□□ -1.59
LRIT3-201ENST00000327908 LYSMD3Q7Z3D4 306 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 LRRTM4Q86VH4 590 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 KCNMB4Q86W47 210 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 PARGQ86W56 976 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 GALNT13Q8IUC8 556 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 CARFQ8N187 725 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 NKAPQ8N5F7 415 aaKnown RBP5.14□□□□□ -1.59
LRIT3-201ENST00000327908 SPATA22Q8NHS9 363 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 CERS2Q96G23 380 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 CDKN2AIPNLQ96HQ2 116 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 SERAC1Q96JX3 654 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 APOOQ9BUR5 198 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 TRIM54Q9BYV2 358 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.14□□□□□ -1.59
LRIT3-201ENST00000327908 SLC13A1Q9BZW2 595 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 MKRN2Q9H000 416 aaKnown RBP5.14□□□□□ -1.59
LRIT3-201ENST00000327908 UCK1Q9HA47 277 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 AASDHPPTQ9NRN7 309 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 ZFATQ9P243 1243 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 NCDNQ9UBB6 729 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 TEX264Q9Y6I9 313 aa5.14□□□□□ -1.59
LRIT3-201ENST00000327908 A0A087X1B8 175 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 AGAP14A8MT82 685 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 MATN2O00339 956 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 MT-CYBP00156 380 aaPredicted RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 MPOP05164 745 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 GSTA1P08263 222 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 AKT1P31749 480 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 ZRANB3Q5FWF4 1079 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 KIAA1211LQ6NV74 962 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 METTL2BQ6P1Q9 378 aaKnown RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 KLC3Q6P597 504 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 SLC23A3Q6PIS1 610 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 SRRM1Q8IYB3 904 aaKnown RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 RGL4Q8IZJ4 473 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 TCAIMQ8N3R3 496 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 CHCHD4Q8N4Q1 142 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 TP53I13Q8NBR0 393 aaPredicted RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 OR6P1Q8NGX9 317 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 IFT81Q8WYA0 676 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 SCARF2Q96GP6 870 aaPredicted RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 SIGLEC10Q96LC7 697 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 OR2M4Q96R27 311 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 CDC6Q99741 560 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 ACSS3Q9H6R3 686 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 ASB8Q9H765 288 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 CD320Q9NPF0 282 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 LATS2Q9NRM7 1088 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 HCN2Q9UL51 889 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 IGLV3-16A0A075B6K0 115 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 NPIPB15A6NHN6 443 aaPredicted RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 TRIM24O15164 1050 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 CD3EAPO15446 510 aaKnown RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 LDB2O43679 373 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 PRAMEF1O95521 474 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 LMNAP02545 664 aaKnown RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 ENO2P09104 434 aaPredicted RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 NUDT17P0C025 328 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 ACRV1P26436 265 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 MC4RP32245 332 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 MSH2P43246 934 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 PFN3P60673 137 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 DHX9Q08211 1270 aaKnown RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 IFFO1Q0D2I5 559 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 ILKQ13418 452 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 NFATC2Q13469 925 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 TRIP13Q15645 432 aaPredicted RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 PTRHD1Q6GMV3 140 aaKnown RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 ZBED8Q8IZ13 594 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 OR4K2Q8NGD2 314 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 ATOH1Q92858 354 aaPredicted RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 NAT6Q93015 286 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 COX14Q96I36 57 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 LRFN3Q9BTN0 628 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 DPEP2Q9H4A9 486 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 RHOJQ9H4E5 214 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 GPR27Q9NS67 375 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 C20orf96Q9NUD7 363 aaPredicted RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 ZDHHC18Q9NUE0 388 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 SYBUQ9NX95 663 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 POLG2Q9UHN1 485 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 NOVA2Q9UNW9 492 aaKnown RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 SMG5Q9UPR3 1016 aaKnown RBP5.13□□□□□ -1.59
LRIT3-201ENST00000327908 MYO7AQ13402 2215 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 KIR2DS5A0A0G2JLQ3 304 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 A0A0G2JNG1 304 aa5.13□□□□□ -1.59
LRIT3-201ENST00000327908 KIR2DS3K7RE56 304 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms