RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 ITGA2BP08514 1039 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 CCDC166P0CW27 439 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 C7P10643 843 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 CYP2A6P11509 494 aaPredicted RBP12.7□□□□□ -0.38
DDX39A-202ENST00000324340 ZNF30P17039 623 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 KRT15P19012 456 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 OGNP20774 298 aaKnown RBP12.7□□□□□ -0.38
DDX39A-202ENST00000324340 LHCGRP22888 699 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 GABRB3P28472 473 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 SPRP35270 261 aaPredicted RBP12.7□□□□□ -0.38
DDX39A-202ENST00000324340 SLC1A2P43004 574 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 LEPRP48357 1165 aaKnown RBP12.7□□□□□ -0.38
DDX39A-202ENST00000324340 PTDSS1P48651 473 aaKnown RBP12.7□□□□□ -0.38
DDX39A-202ENST00000324340 SUOXP51687 545 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 LIMK2P53671 638 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 TMPRSS15P98073 1019 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 TFF2Q03403 129 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 GRSF1Q12849 480 aaKnown RBP eCLIP12.7□□□□□ -0.38
DDX39A-202ENST00000324340 ILF2Q12905 390 aaKnown RBP12.7□□□□□ -0.38
DDX39A-202ENST00000324340 IER5LQ5T953 404 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 ZNF470Q6ECI4 717 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 AFTPHQ6ULP2 937 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 SH2D5Q6ZV89 423 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 ZC3HC1Q86WB0 502 aaKnown RBP12.7□□□□□ -0.38
DDX39A-202ENST00000324340 DENND6AQ8IWF6 608 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 CHPFQ8IZ52 775 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 ALDH16A1Q8IZ83 802 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 PAF1Q8N7H5 531 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 FAM13CQ8NE31 585 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 OR4L1Q8NH43 312 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 LRRC8CQ8TDW0 803 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 GATA6Q92908 595 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 UTP4Q969X6 686 aaKnown RBP12.7□□□□□ -0.38
DDX39A-202ENST00000324340 ISL2Q96A47 359 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 RSPH9Q9H1X1 276 aaPredicted RBP12.7□□□□□ -0.38
DDX39A-202ENST00000324340 RHOJQ9H4E5 214 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 NKIRAS1Q9NYS0 192 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 B4GALT6Q9UBX8 382 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 DUSP12Q9UNI6 340 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 C5orf42Q9H799 3197 aa12.7□□□□□ -0.38
DDX39A-202ENST00000324340 A0A0U1RQS6 177 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 OR51F1A6NGY5 319 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 FOXO6A8MYZ6 492 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 TRIM49D1C9J1S8 452 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 C1QTNF3-AMACRE9PGA6 284 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 KPNA3O00505 521 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 CD3EAPO15446 510 aaKnown RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 AHSGP02765 367 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 PIM1P11309 404 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 PTPN4P29074 926 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 NTSR1P30989 418 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 VIPR1P32241 457 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 FOXN2P32314 431 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 TIE1P35590 1138 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 MAGEA12P43365 314 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 POLD2P49005 469 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 MRPS21P82921 87 aaKnown RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 XIAPP98170 497 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 IL9RQ01113 521 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 PTSQ03393 145 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 RALGDSQ12967 914 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 CTBP1Q13363 440 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 PEX6Q13608 980 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 SMAD1Q15797 465 aaKnown RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 TYSND1Q2T9J0 566 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 FBXO43Q4G163 708 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 SLC44A4Q53GD3 710 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 LRRC66Q68CR7 880 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 MRNIPQ6NTE8 343 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 DPPA4Q7L190 304 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 PARS2Q7L3T8 475 aaKnown RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 TRMT11Q7Z4G4 463 aaKnown RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 PTAR1Q7Z6K3 402 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 TSPAN33Q86UF1 283 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 ADHFE1Q8IWW8 467 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 RAVER1Q8IY67 606 aaKnown RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 SRRM1Q8IYB3 904 aaKnown RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 IL17RCQ8NAC3 791 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 OR6P1Q8NGX9 317 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 ARRDC3Q96B67 414 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 PPP1R16AQ96I34 528 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 EPB41L1Q9H4G0 881 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 PCDH12Q9NPG4 1184 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 ZDHHC4Q9NPG8 344 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 CATSPERZQ9NTU4 200 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 PCMTD2Q9NV79 361 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 DLGAP2Q9P1A6 1054 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 MARCH4Q9P2E8 410 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 NKX1-2Q9UD57 310 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 FKBPLQ9UIM3 349 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 TMEM120BA0PK00 339 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 A8MUI8 341 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 GAPDHSO14556 408 aaPredicted RBP12.69□□□□□ -0.38
DDX39A-202ENST00000324340 RFPL1O75677 317 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 S1PR4O95977 384 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 MT-ND3P03897 115 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 CREB1P16220 341 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 MC4RP32245 332 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 MMP12P39900 470 aa12.69□□□□□ -0.38
DDX39A-202ENST00000324340 CCNFP41002 786 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms