RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 PRSS36Q5K4E3 855 aa16.9■□□□□ 0.3
SSR4-201ENST00000320857 CUZD1Q86UP6 607 aa16.9■□□□□ 0.3
SSR4-201ENST00000320857 SPNS2Q8IVW8 549 aa16.9■□□□□ 0.3
SSR4-201ENST00000320857 PCDH20Q8N6Y1 951 aaKnown RBP16.9■□□□□ 0.3
SSR4-201ENST00000320857 KCNJ9Q92806 393 aa16.9■□□□□ 0.3
SSR4-201ENST00000320857 FAM136AQ96C01 138 aa16.9■□□□□ 0.3
SSR4-201ENST00000320857 OTUB2Q96DC9 234 aa16.9■□□□□ 0.3
SSR4-201ENST00000320857 RPL10LQ96L21 214 aaKnown RBP16.9■□□□□ 0.3
SSR4-201ENST00000320857 WDR55Q9H6Y2 383 aaPredicted RBP16.9■□□□□ 0.3
SSR4-201ENST00000320857 SPHK2Q9NRA0 654 aa16.9■□□□□ 0.3
SSR4-201ENST00000320857 PCDHB1Q9Y5F3 818 aa16.9■□□□□ 0.3
SSR4-201ENST00000320857 SYCE1LA8MT33 242 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 DCXO43602 365 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 OR1I1O60431 355 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 EPHA3P29320 983 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 ADSLP30566 484 aaPredicted RBP16.89■□□□□ 0.29
SSR4-201ENST00000320857 GKP32189 559 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 HNF1BP35680 557 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 STK19P49842 368 aaPredicted RBP16.89■□□□□ 0.29
SSR4-201ENST00000320857 KLF10Q13118 480 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 PDCD2Q16342 344 aaPredicted RBP16.89■□□□□ 0.29
SSR4-201ENST00000320857 SETMARQ53H47 684 aaPredicted RBP16.89■□□□□ 0.29
SSR4-201ENST00000320857 CTSL3PQ5NE16 218 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 LYPLAL1Q5VWZ2 237 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 PTGR2Q8N8N7 351 aaPredicted RBP16.89■□□□□ 0.29
SSR4-201ENST00000320857 RIN3Q8TB24 985 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 AGAP11Q8TF27 550 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 EXT2Q93063 718 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 EID2BQ96D98 161 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 ATOH8Q96SQ7 321 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 PBX4Q9BYU1 374 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 CPEB1Q9BZB8 566 aaKnown RBP16.89■□□□□ 0.29
SSR4-201ENST00000320857 GSTO2Q9H4Y5 243 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 RNF112Q9ULX5 631 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 TMCO1Q9UM00 188 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 YBX2Q9Y2T7 364 aaKnown RBP16.89■□□□□ 0.29
SSR4-201ENST00000320857 ANKRD36A6QL64 1941 aa16.89■□□□□ 0.29
SSR4-201ENST00000320857 E5RI56 91 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 H3BMM5 538 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 PRMT5O14744 637 aaPredicted RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 SLC9A3R1O14745 358 aaPredicted RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 SUPT7LO94864 414 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 POP4O95707 220 aaKnown RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 TYRP14679 529 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 ITGALP20701 1170 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 PTPN5P54829 565 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 NAA20P61599 178 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 CDKN3Q16667 212 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 ACCSLQ4AC99 568 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 UNC50Q53HI1 259 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 CARD16Q5EG05 197 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 NXNQ6DKJ4 435 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 GRAMD4Q6IC98 578 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 SNX20Q7Z614 316 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 CBARPQ8N350 705 aaPredicted RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 CPSF7Q8N684 471 aaKnown RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 LYSMD1Q96S90 227 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 NKX2-4Q9H2Z4 354 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 DENND2DQ9H6A0 471 aaPredicted RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 A0A0U1RQS6 177 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 A0A1W2PQ67 120 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 UBXN8O00124 270 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 PER2O15055 1255 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 NIPSNAP2O75323 286 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 PRAMEF1O95521 474 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 LMNAP02545 664 aaKnown RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 GFAPP14136 432 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 ZNF7P17097 686 aaPredicted RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 CHRM3P20309 590 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 RPS3P23396 243 aaKnown RBP eCLIP16.88■□□□□ 0.295e-7■■■■■ 35
SSR4-201ENST00000320857 RAP1GDS1P52306 607 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 IL2P60568 153 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 NTHL1P78549 312 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 ECT2LQ008S8 904 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 ASTLQ6HA08 431 aaPredicted RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 FAM151BQ6UXP7 276 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 USP45Q70EL2 814 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 GRASPQ7Z6J2 395 aaPredicted RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 PHTF2Q8N3S3 785 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 GRIN3AQ8TCU5 1115 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 ZNF707Q96C28 371 aaPredicted RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 MAELQ96JY0 434 aaKnown RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 PPP1R36Q96LQ0 422 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 ZNF641Q96N77 438 aaPredicted RBP16.88■□□□□ 0.29
SSR4-201ENST00000320857 SLC2A11Q9BYW1 496 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 P2RY12Q9H244 342 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 SUV39H2Q9H5I1 410 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 CD248Q9HCU0 757 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 MRGBPQ9NV56 204 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 MARK1Q9P0L2 795 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 MSRAQ9UJ68 235 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 PLA2G4CQ9UP65 541 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 HCFC2Q9Y5Z7 792 aa16.88■□□□□ 0.29
SSR4-201ENST00000320857 TMEM233B4DJY2 109 aa16.87■□□□□ 0.29
SSR4-201ENST00000320857 SUPT3HB4E1H0 165 aa16.87■□□□□ 0.29
SSR4-201ENST00000320857 SDHDO14521 159 aa16.87■□□□□ 0.29
SSR4-201ENST00000320857 SUPT3HO75486 399 aa16.87■□□□□ 0.29
SSR4-201ENST00000320857 CLDN7O95471 211 aa16.87■□□□□ 0.29
SSR4-201ENST00000320857 COX4I1P13073 169 aa16.87■□□□□ 0.29
SSR4-201ENST00000320857 SPAM1P38567 509 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms