RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 SNAP25P60880 206 aa9.3□□□□□ -0.92
BDNF-201ENST00000314915 PON3Q15166 354 aa9.3□□□□□ -0.92
BDNF-201ENST00000314915 SLC36A3Q495N2 470 aa9.3□□□□□ -0.92
BDNF-201ENST00000314915 CLLU1Q5K131 121 aa9.3□□□□□ -0.92
BDNF-201ENST00000314915 ELP2Q6IA86 826 aa9.3□□□□□ -0.92
BDNF-201ENST00000314915 ERICH5Q6P6B1 374 aa9.3□□□□□ -0.92
BDNF-201ENST00000314915 TOP1MTQ969P6 601 aa9.3□□□□□ -0.92
BDNF-201ENST00000314915 ELAC1Q9H777 363 aaKnown RBP9.3□□□□□ -0.92
BDNF-201ENST00000314915 IMPAD1Q9NX62 359 aa9.3□□□□□ -0.92
BDNF-201ENST00000314915 MBD1Q9UIS9 605 aaPredicted RBP9.3□□□□□ -0.92
BDNF-201ENST00000314915 TP73O15350 636 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 SIGLEC6O43699 453 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 PGRP06401 933 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 COX4I1P13073 169 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 TIMP2P16035 220 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 BEX3Q00994 111 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 PTGDRQ13258 359 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 INTS11Q5TA45 600 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 IRAK1BP1Q5VVH5 260 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 NAPRTQ6XQN6 538 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 ZCCHC9Q8N567 271 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 TMIEQ8NEW7 156 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 PDCD10Q9BUL8 212 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 HDHD5Q9BXW7 423 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 C2orf40Q9H1Z8 148 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 ELOVL6Q9H5J4 265 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 ARNT2Q9HBZ2 717 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 CNOT6Q9ULM6 557 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 HSPB11Q9Y547 144 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 PCDHGA9Q9Y5G4 932 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 PCDHGA7Q9Y5G6 932 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 MYH14Q7Z406 1995 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 MED1Q15648 1581 aaPredicted RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 GPAA1O43292 621 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 IL33O95760 270 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 FCGR1AP12314 374 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 XRCC1P18887 633 aaPredicted RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 RPL10P27635 214 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 IL1R2P27930 398 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 KCNJ1P48048 391 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 KPNA2P52292 529 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 GALCP54803 685 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 ANTXR2P58335 489 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 PUM1Q14671 1186 aaKnown RBP eCLIP9.29□□□□□ -0.92
BDNF-201ENST00000314915 SMAD2Q15796 467 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 TMEM44Q2T9K0 475 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 TTC38Q5R3I4 469 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 RASAL3Q86YV0 1011 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 MCFD2Q8NI22 146 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 CABLES1Q8TDN4 633 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 ELMO1Q92556 727 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 ALG3Q92685 438 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 RPL3LQ92901 407 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 CD101Q93033 1021 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 CSPG4P5Q96PW8 444 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 GPR61Q9BZJ8 451 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 NUAK2Q9H093 628 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 ALX4Q9H161 411 aaPredicted RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 C11orf49Q9H6J7 331 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 GAREM1Q9H706 876 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 SAYSD1Q9NPB0 183 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 NDRG3Q9UGV2 375 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 ELF5Q9UKW6 265 aaPredicted RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 SCML1Q9UN30 329 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 PALLDQ8WX93 1383 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 CPS1P31327 1500 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 CIB4A0PJX0 185 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 MEIOCA2RUB1 952 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 MFSD2BA6NFX1 497 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 GABARAPO95166 117 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 ETV4P43268 484 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 DOC2AQ14183 400 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 HSF5Q4G112 596 aaPredicted RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 EFHC2Q5JST6 749 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 CNSTQ6PJW8 725 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 SORT1Q99523 831 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 ZSWIM1Q9BR11 485 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 WWOXQ9NZC7 414 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 VTI1BQ9UEU0 232 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 SH3BGRL2Q9UJC5 107 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 MRPS23Q9Y3D9 190 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 PIK3C2AO00443 1686 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 FAM221BA6H8Z2 402 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 AGAP5A6NIR3 686 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 EEF2KO00418 725 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 IFNA7P01567 189 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 TNNC2P02585 160 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 IVDP26440 423 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 DEFA6Q01524 100 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 FGL2Q14314 439 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 GRB7Q14451 532 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 STXBP2Q15833 593 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 THEM4Q5T1C6 240 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 IL31Q6EBC2 164 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 CASC4Q6P4E1 433 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 IRF2BP2Q7Z5L9 587 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 DHRSXQ8N5I4 330 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 EFCAB3Q8N7B9 438 aa9.29□□□□□ -0.92
BDNF-201ENST00000314915 TFB1MQ8WVM0 346 aaKnown RBP9.29□□□□□ -0.92
BDNF-201ENST00000314915 FAM111AQ96PZ2 611 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms