RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 PTK2BQ14289 1009 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 SUZ12Q15022 739 aaKnown RBP11.95□□□□□ -0.5
SCFD1-201ENST00000311943 ANKRD22Q5VYY1 191 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 CRTC3Q6UUV7 619 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 KLHDC8BQ8IXV7 354 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 CCHCR1Q8TD31 782 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 PKD2L2Q9NZM6 624 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 CEP295Q9C0D2 2601 aa11.95□□□□□ -0.5
SCFD1-201ENST00000311943 DNAJC6O75061 913 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 AVILO75366 819 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 EPOP01588 193 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 APRTP07741 180 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 CTSEP14091 401 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 CTBSQ01459 385 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 CCDC70Q6NSX1 233 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 ADAMTSL4Q6UY14 1074 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 CHST15Q7LFX5 561 aaPredicted RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 ZNF761Q86XN6 746 aaPredicted RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 DCP2Q8IU60 420 aaKnown RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 BEND7Q8N7W2 519 aaPredicted RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 KYQ8NBH2 561 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 HIC2Q96JB3 615 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 DNAJC1Q96KC8 554 aaKnown RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 DDX47Q9H0S4 455 aaKnown RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 OR2AG1Q9H205 316 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 PHPT1Q9NRX4 125 aaPredicted RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 HAUS2Q9NVX0 235 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 KCNK6Q9Y257 313 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 SLC17A4Q9Y2C5 497 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 AAR2Q9Y312 384 aaKnown RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 PLXNB3Q9ULL4 1909 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 PTPRBP23467 1997 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 B4DGG1 531 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 TNFSF14O43557 240 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 DFNA5O60443 496 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 STK10O94804 968 aaKnown RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 SLC25A14O95258 325 aaPredicted RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 TNFP01375 233 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 FGF1P05230 155 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 HLA-DPA1P20036 260 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 PMLP29590 882 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 ADCY8P40145 1251 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 MAZP56270 477 aaKnown RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 XIAPP98170 497 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 PEX6Q13608 980 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 SEPT6Q14141 434 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 PRPSAP1Q14558 356 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 SLC14A2Q15849 920 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 P3H1Q32P28 736 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 PYCR3Q53H96 274 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 CES3Q6UWW8 571 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 ZNF534Q76KX8 674 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 DET1Q7L5Y6 550 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 GSTA5Q7RTV2 222 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 TAF8Q7Z7C8 310 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 ADGRG6Q86SQ4 1221 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 ZSCAN30Q86W11 494 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 ZNF547Q8IVP9 402 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 FAM46DQ8NEK8 389 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 MAGOHBQ96A72 148 aaKnown RBP11.94□□□□□ -0.5
SCFD1-201ENST00000311943 DPEP2Q9H4A9 486 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 SPASTQ9UBP0 616 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 ZNHIT2Q9UHR6 403 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 ZZEF1O43149 2961 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 CFAP47Q6ZTR5 3102 aa11.94□□□□□ -0.5
SCFD1-201ENST00000311943 PMS2P1A4D2B8 440 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 AP2A1O95782 977 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 ACP5P13686 325 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 CTSCP53634 463 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 BASP1P80723 227 aaKnown RBP11.93□□□□□ -0.5
SCFD1-201ENST00000311943 CREG2Q8IUH2 290 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 NRSN1Q8IZ57 195 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 OXR1Q8N573 874 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 CCDC89Q8N998 374 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 NLGN3Q9NZ94 848 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.93□□□□□ -0.55e-7■■■□□ 17.9
SCFD1-201ENST00000311943 FAM8A1Q9UBU6 413 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 NEU2Q9Y3R4 380 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 DGKBQ9Y6T7 804 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 C1QTNF9BB2RNN3 333 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 LMO7DNF2Z398 122 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 H3BM21 787 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 GOLGA8MH3BSY2 632 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 C1QTNF9P0C862 333 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 CKMT2P17540 419 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 STIP1P31948 543 aaKnown RBP11.93□□□□□ -0.5
SCFD1-201ENST00000311943 DAB2P98082 770 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 ZNF765Q7L2R6 523 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 ERMP1Q7Z2K6 904 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 GLRX5Q86SX6 157 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 AGGF1Q8N302 714 aaeCLIP11.93□□□□□ -0.5
SCFD1-201ENST00000311943 MPP5Q8N3R9 675 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 GLYATL1Q969I3 302 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 PWWP2AQ96N64 755 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 BOCQ9BWV1 1114 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 IL1RAPL1Q9NZN1 696 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 DNAJC16Q9Y2G8 782 aa11.93□□□□□ -0.5
SCFD1-201ENST00000311943 GLYATL1P3A0A0U1RQE8 302 aa11.92□□□□□ -0.5
SCFD1-201ENST00000311943 OR2AG2A6NM03 316 aa11.92□□□□□ -0.5
SCFD1-201ENST00000311943 STX7O15400 261 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms