RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 MBOAT7Q96N66 472 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 DNAJC5Q9H3Z4 198 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 MARK1Q9P0L2 795 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 RBM7Q9Y580 266 aaKnown RBP11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 SQORQ9Y6N5 450 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 RBMXL2O75526 392 aaKnown RBP11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 NR2C1P13056 603 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 USP46P62068 366 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 DENND1AQ8TEH3 1009 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 DUS2Q9NX74 493 aaKnown RBP11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 GRIN2DO15399 1336 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 FSBPO95073 299 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 OR5F1O95221 314 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 SRPRAP08240 638 aaKnown RBP11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 DDX6P26196 483 aaKnown RBP eCLIP11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 ILF3Q12906 894 aaKnown RBP eCLIP11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 PYDC2Q56P42 97 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 CRTC3Q6UUV7 619 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 UBE2R2Q712K3 238 aaPredicted RBP11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 ACOT12Q8WYK0 555 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 ZHX1-C8orf76Q96EF9 292 aa11.28□□□□□ -0.6
VCPIP1-201ENST00000310421 A0A1B0GVM2 712 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 TCAF2A6NFQ2 919 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 G3V2T6 193 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 SEMA3DO95025 777 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 MATN4O95460 622 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 SEC24AO95486 1093 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 GABRR2P28476 465 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 NUMBP49757 651 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 TRAP1Q12931 704 aaKnown RBP11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 CAPSQ13938 189 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 GPR158Q5T848 1215 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 CDYL2Q8N8U2 506 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 RNPEPL1Q9HAU8 725 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 TMEM27Q9HBJ8 222 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 GPN1Q9HCN4 374 aaPredicted RBP11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 POLMQ9NP87 494 aaPredicted RBP11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 POLR3HQ9Y535 204 aaPredicted RBP11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 ROBO1Q9Y6N7 1651 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 STK16O75716 305 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 CLDN9O95484 217 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 C8GP07360 202 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 SDC2P34741 201 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 ZNF155Q12901 538 aaPredicted RBP11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 LRRC55Q6ZSA7 311 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 CKAP2Q8WWK9 683 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 LPPQ93052 612 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 TCF12Q99081 682 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 ATXN10Q9UBB4 475 aa11.27□□□□□ -0.6
VCPIP1-201ENST00000310421 LRRC10BA6NIK2 292 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 CHP2O43745 196 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 DUSP11O75319 330 aaKnown RBP11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 POP4O95707 220 aaKnown RBP11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 PGK1P00558 417 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 CASRP41180 1078 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 ZACNQ401N2 412 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 IDH3BO43837 385 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 RNASEH2AO75792 299 aaKnown RBP11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 NDST3O95803 873 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 FGFR3P22607 806 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 CDH4P55283 916 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 LCLAT1Q6UWP7 414 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 PYDC1Q8WXC3 89 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 HDAC10Q969S8 669 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 DUSP9Q99956 384 aaKnown RBP11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 TCRBV9S1A1TA0A576 114 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 YBEYP58557 167 aaPredicted RBP11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 CRELD2Q6UXH1 353 aaPredicted RBP11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 HIPK1Q86Z02 1210 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 HCAR2Q8TDS4 363 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 SMG7Q92540 1137 aaKnown RBP11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 VWA7Q9Y334 891 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 C22orf31O95567 290 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 RHOQP17081 205 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 ARF4P18085 180 aaPredicted RBP11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 RAD51AP1Q96B01 352 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 USP20Q9Y2K6 914 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 FAM237BA0A1B0GVD1 139 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 YDJCA8MPS7 323 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 RPIAP49247 311 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 HAS1Q92839 578 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 DNASE1L2Q92874 299 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 CDH19Q9H159 772 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 SLC28A3Q9HAS3 691 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 RAPGEFL1Q9UHV5 662 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 NR2E1Q9Y466 385 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 DDX60Q8IY21 1712 aaKnown RBP11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 FPGTO14772 594 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 UNC5CO95185 931 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 GNPDA1P46926 289 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 PPP3CAQ08209 521 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 RASGEF1BQ0VAM2 473 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 ATG14Q6ZNE5 492 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 ZCCHC23Q6ZST2 131 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 HEATR4Q86WZ0 1026 aa11.27□□□□□ -0.61
VCPIP1-201ENST00000310421 NPEPPSL1A6NEC2 478 aa11.26□□□□□ -0.61
VCPIP1-201ENST00000310421 CAPN14A8MX76 684 aa11.26□□□□□ -0.61
VCPIP1-201ENST00000310421 CORO1AP31146 461 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms