RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 OR6B1O95007 311 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CTDNEP1O95476 244 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SNRPB2P08579 225 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 HNRNPH3P31942 346 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 HSD17B3P37058 310 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CD86P42081 329 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CASP4P49662 377 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 HADHBP55084 474 aaKnown RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CDC42P60953 191 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 VAC14Q08AM6 782 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 PRKD1Q15139 912 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ELOCQ15369 112 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 LRIF1Q5T3J3 769 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ZCCHC12Q6PEW1 402 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SLC9B2Q86UD5 537 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CROCCP3Q8IVE0 287 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 CCDC54Q8NEL0 328 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ITFG1Q8TB96 612 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ETNK2Q9NVF9 386 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF282Q9UDV7 671 aaPredicted RBP3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SEC14L3Q9UDX4 400 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 VWA7Q9Y334 891 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 DOCK3Q8IZD9 2030 aa3.18□□□□□ -1.9
CLOCK-201ENST00000309964 SMIM28A0A1B0GU29 152 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SSR2P43308 183 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MAGEA11P43364 429 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DGKGP49619 791 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 RAB25P57735 213 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MAMLD1Q13495 774 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GRM2Q14416 872 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 INAQ16352 499 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GTF2IRD2BQ6EKJ0 949 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 C14orf80Q86SX3 495 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GTF2IRD2Q86UP8 949 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CLEC10AQ8IUN9 316 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GPIHBP1Q8IV16 184 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ARHGEF19Q8IW93 802 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 RAVER1Q8IY67 606 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 NIPA2Q8N8Q9 360 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 KIAA0895Q8NCT3 520 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 EZH1Q92800 747 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 HIST1H2AAQ96QV6 131 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PANX1Q96RD7 426 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PRRX2Q99811 253 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 EXOSC4Q9NPD3 245 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 B3GAT2Q9NPZ5 323 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 RBM12Q9NTZ6 932 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 MBD2Q9UBB5 411 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 C4BP0C0L5 1744 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ALS2Q96Q42 1657 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GLYATL1P3A0A0U1RQE8 302 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 EFCAB10A6NFE3 127 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GJE1A6NN92 205 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PEX10O60683 326 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ATG7O95352 703 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ADH5P11766 374 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 HGFP14210 728 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 KCNE1P15382 129 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CAPGP40121 348 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 HCAR3P49019 387 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CDH13P55290 713 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 HNRNPKP61978 463 aaKnown RBP eCLIP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CAMK1Q14012 370 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DSG2Q14126 1118 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DPYSL3Q14195 570 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GRB14Q14449 540 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 NDUFA5Q16718 116 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SPIN4Q56A73 249 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF776Q68DI1 518 aaPredicted RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TCEAL6Q6IPX3 200 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 LRRTM4Q86VH4 590 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 KSR1Q8IVT5 923 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CMTR2Q8IYT2 770 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SLC4A11Q8NBS3 891 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ENKURQ8TC29 256 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TRPM4Q8TD43 1214 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CAPSLQ8WWF8 208 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 C1orf74Q96LT6 269 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TAPBPLQ9BX59 468 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 REXO4Q9GZR2 422 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 EPB41L1Q9H4G0 881 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PRPF19Q9UMS4 504 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PKD1L3Q7Z443 1732 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CCDC195A0A1B0GUA6 201 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 KCNK1O00180 336 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PPEF2O14830 753 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 WNT9AO14904 365 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 DDX3YO15523 660 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 TSPAN6O43657 245 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 RPP40O75818 363 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 GATBO75879 557 aaKnown RBP3.17□□□□□ -1.9
CLOCK-201ENST00000309964 LRIG2O94898 1065 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF682O95780 498 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PIGRP01833 764 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 SOD2P04179 222 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CCL5P13501 91 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 ITGB5P18084 799 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 CDH3P22223 829 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 PTPN4P29074 926 aa3.17□□□□□ -1.9
CLOCK-201ENST00000309964 IL12BP29460 328 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms