RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 PLEKHG4BQ96PX9 1271 aa9.03□□□□□ -0.96
PDE4D-201ENST00000309641 ELF4Q99607 663 aaPredicted RBP9.03□□□□□ -0.96
PDE4D-201ENST00000309641 NLE1Q9NVX2 485 aaPredicted RBP9.03□□□□□ -0.96
PDE4D-201ENST00000309641 UCKL1Q9NWZ5 548 aa9.03□□□□□ -0.96
PDE4D-201ENST00000309641 DNAJC28Q9NX36 388 aa9.03□□□□□ -0.96
PDE4D-201ENST00000309641 GRHL1Q9NZI5 618 aa9.03□□□□□ -0.96
PDE4D-201ENST00000309641 NFKBIL1Q9UBC1 381 aaPredicted RBP9.03□□□□□ -0.96
PDE4D-201ENST00000309641 DMGDHQ9UI17 866 aaKnown RBP9.03□□□□□ -0.96
PDE4D-201ENST00000309641 TCAF1Q9Y4C2 921 aa9.03□□□□□ -0.96
PDE4D-201ENST00000309641 ST14Q9Y5Y6 855 aa9.03□□□□□ -0.96
PDE4D-201ENST00000309641 GLYATL1P3A0A0U1RQE8 302 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 A0A1B0GTQ1 180 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 RGSL1A5PLK6 1076 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 FAM187AA6NFU0 413 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 PRAMEF1O95521 474 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CEACAM5P06731 702 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 MYCLP1P12525 358 aaPredicted RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ADRA1DP25100 572 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ATXN3P54252 364 aaPredicted RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 C1orf61Q13536 156 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ZNF423Q2M1K9 1284 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 UAP1L1Q3KQV9 507 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 TSTD2Q5T7W7 516 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 STPG1Q5TH74 334 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 HIBCHQ6NVY1 386 aaPredicted RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 MACC1Q6ZN28 852 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 MARK2Q7KZI7 788 aaKnown RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 MAATS1Q7Z4T9 603 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 PARGQ86W56 976 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 HID1Q8IV36 788 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 IGDCC3Q8IVU1 814 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 PIANPQ8IYJ0 282 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 TRAM1L1Q8N609 369 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 MCUQ8NE86 351 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 STYXQ8WUJ0 223 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 HDAC10Q969S8 669 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 MFSD3Q96ES6 412 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 SNF8Q96H20 258 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CDKN2AIPNLQ96HQ2 116 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 HIC2Q96JB3 615 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 SIGLEC10Q96LC7 697 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 WDR83Q9BRX9 315 aaKnown RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 FRMD8Q9BZ67 464 aaPredicted RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 KCTD5Q9NXV2 234 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 IL1RAPL1Q9NZN1 696 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 PRKAB1Q9Y478 270 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ZNF106Q9H2Y7 1883 aaKnown RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 PLXNB3Q9ULL4 1909 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CNOT1A5YKK6 2376 aaKnown RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 HEATR9A2RTY3 570 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CCDC162PA2VCL2 907 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CTAGE15A4D2H0 777 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CACNB4O00305 520 aaPredicted RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 SRP72O76094 671 aaKnown RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 SLC25A14O95258 325 aaPredicted RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CTAGE8P0CG41 777 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ARNTP27540 789 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 MC4RP32245 332 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 NPY2RP49146 381 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 KIAA1024LP59773 190 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 SRP54P61011 504 aaKnown RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 PCID2Q5JVF3 399 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 PSAPL1Q6NUJ1 521 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 C8orf74Q6P047 294 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CTAGE6Q86UF2 777 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CTAGE4Q8IX94 777 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 RAVER1Q8IY67 606 aaKnown RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 SLC25A45Q8N413 288 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 MMGT1Q8N4V1 131 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 OR56A4Q8NGH8 313 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CCL4L1Q8NHW4 92 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ZNF398Q8TD17 642 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 BTN2A2Q8WVV5 523 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 GLYATL1Q969I3 302 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 SKA1Q96BD8 255 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 WDR92Q96MX6 357 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 FCRL3Q96P31 734 aaPredicted RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 RANBP9Q96S59 729 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ZSCAN5AQ9BUG6 496 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ZDHHC5Q9C0B5 715 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 IL22Q9GZX6 179 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ASB8Q9H765 288 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ERVMER34-1Q9H9K5 563 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 L2HGDHQ9H9P8 463 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 CYP4F12Q9HCS2 524 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 TMEM9BQ9NQ34 198 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 PHPT1Q9NRX4 125 aaPredicted RBP9.02□□□□□ -0.97
PDE4D-201ENST00000309641 TM7SF3Q9NS93 570 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 BFARQ9NZS9 450 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ATXN10Q9UBB4 475 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 MOSPD1Q9UJG1 213 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 ANAPC5Q9UJX4 755 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 BTBD3Q9Y2F9 522 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 PLEKHM1Q9Y4G2 1056 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 LRP4O75096 1905 aa9.02□□□□□ -0.97
PDE4D-201ENST00000309641 PRSS38A1L453 326 aa9.01□□□□□ -0.97
PDE4D-201ENST00000309641 GOLGA8KD6RF30 607 aa9.01□□□□□ -0.97
PDE4D-201ENST00000309641 GOLGA8TH3BQL2 631 aa9.01□□□□□ -0.97
PDE4D-201ENST00000309641 MAGEC1O60732 1142 aa9.01□□□□□ -0.97
PDE4D-201ENST00000309641 PPFIA2O75334 1257 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms