RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 CHST15Q7LFX5 561 aaPredicted RBP19.37■□□□□ 0.69
LIME1-201ENST00000309546 RAVER1Q8IY67 606 aaKnown RBP19.37■□□□□ 0.69
LIME1-201ENST00000309546 IMP4Q96G21 291 aaKnown RBP19.37■□□□□ 0.69
LIME1-201ENST00000309546 GOLPH3Q9H4A6 298 aa19.37■□□□□ 0.69
LIME1-201ENST00000309546 SHOC2Q9UQ13 582 aa19.37■□□□□ 0.69
LIME1-201ENST00000309546 PCYT1BQ9Y5K3 369 aaPredicted RBP19.37■□□□□ 0.69
LIME1-201ENST00000309546 SMG1Q96Q15 3661 aaKnown RBP19.37■□□□□ 0.69
LIME1-201ENST00000309546 PPM1DO15297 605 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 ETV5P41161 510 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 MAGEA1P43355 309 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 LRP8Q14114 963 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 NR1D2Q14995 579 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 C16orf72Q14CZ0 275 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 TAF1BQ53T94 588 aaPredicted RBP19.36■□□□□ 0.69
LIME1-201ENST00000309546 NKAIN2Q5VXU1 208 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 ZNF761Q86XN6 746 aaPredicted RBP19.36■□□□□ 0.69
LIME1-201ENST00000309546 RCBTB1Q8NDN9 531 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 TMEM159Q96B96 161 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 TRIB3Q96RU7 358 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 SPATA16Q9BXB7 569 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 SLC25A51Q9H1U9 297 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 ZFYVE1Q9HBF4 777 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 KCNK4Q9NYG8 393 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 AKAP7Q9P0M2 348 aaPredicted RBP19.36■□□□□ 0.69
LIME1-201ENST00000309546 VPS18Q9P253 973 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 SAE1Q9UBE0 346 aaPredicted RBP19.36■□□□□ 0.69
LIME1-201ENST00000309546 CNOT6Q9ULM6 557 aaKnown RBP19.36■□□□□ 0.69
LIME1-201ENST00000309546 KCNK6Q9Y257 313 aa19.36■□□□□ 0.69
LIME1-201ENST00000309546 A0A0A6YYK5 440 aaPredicted RBP19.35■□□□□ 0.69
LIME1-201ENST00000309546 PRAMEF33A0A0G2JMD5 474 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 PSTPIP1O43586 416 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 PRAMEF10O60809 474 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 DNAJC6O75061 913 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 MT-CYBP00156 380 aaPredicted RBP19.35■□□□□ 0.69
LIME1-201ENST00000309546 ACP5P13686 325 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 PECAM1P16284 738 aaPredicted RBP19.35■□□□□ 0.69
LIME1-201ENST00000309546 CDKN2BP42772 138 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 CDK18Q07002 472 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 TCEAL1Q15170 157 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 ZNF569Q5MCW4 686 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 CCDC81Q6ZN84 652 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 TC2NQ8N9U0 490 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 SPATA22Q8NHS9 363 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 SLC37A2Q8TED4 501 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 CCDC74BQ96LY2 380 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 GLOD4Q9HC38 313 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 ARFGAP3Q9NP61 516 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 UBP1Q9NZI7 540 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 TFR2Q9UP52 801 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 ZNF711Q9Y462 761 aa19.35■□□□□ 0.69
LIME1-201ENST00000309546 RGSL1A5PLK6 1076 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 CST8O60676 142 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 PMPCBO75439 489 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 CD1CP29017 333 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 GPR3P46089 330 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 RHDQ02161 417 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 TFDP2Q14188 446 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 PRKD1Q15139 912 aaPredicted RBP19.34■□□□□ 0.69
LIME1-201ENST00000309546 TGIF1Q15583 401 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 ZNF648Q5T619 568 aaPredicted RBP19.34■□□□□ 0.69
LIME1-201ENST00000309546 SPOCD1Q6ZMY3 1216 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 CCDC50Q8IVM0 306 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 GPR26Q8NDV2 337 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 TFB1MQ8WVM0 346 aaKnown RBP19.34■□□□□ 0.69
LIME1-201ENST00000309546 USP7Q93009 1102 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 HAUS1Q96CS2 278 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 EID2BQ96D98 161 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 SLC38A3Q99624 504 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 GPR63Q9BZJ6 419 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 ALG6Q9Y672 507 aa19.34■□□□□ 0.69
LIME1-201ENST00000309546 IGHV1OR21-1A0A087WYE8 117 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 IGHV5-10-1A0A0J9YXX1 117 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 F5H423 210 aaPredicted RBP19.33■□□□□ 0.68
LIME1-201ENST00000309546 ERVH48-1M5A8F1 160 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 TK2O00142 265 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 NVLO15381 856 aaKnown RBP19.33■□□□□ 0.68
LIME1-201ENST00000309546 SNX2O60749 519 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 EML2O95834 649 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 MPSTP25325 297 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 PTPN3P26045 913 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 NR2C2P49116 596 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 CLPPQ16740 277 aaPredicted RBP19.33■□□□□ 0.68
LIME1-201ENST00000309546 TEX44Q53QW1 395 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 KIAA1614Q5VZ46 1190 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 CCDC70Q6NSX1 233 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 SARM1Q6SZW1 724 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 ZNF574Q6ZN55 896 aaPredicted RBP19.33■□□□□ 0.68
LIME1-201ENST00000309546 BZW1Q7L1Q6 419 aaKnown RBP19.33■□□□□ 0.68
LIME1-201ENST00000309546 AHCYL2Q96HN2 611 aaKnown RBP19.33■□□□□ 0.68
LIME1-201ENST00000309546 CCNL2Q96S94 520 aaPredicted RBP19.33■□□□□ 0.68
LIME1-201ENST00000309546 RMI1Q9H9A7 625 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 MAGEE1Q9HCI5 957 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 FOXJ2Q9P0K8 574 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 BAHCC1Q9P281 2608 aa19.33■□□□□ 0.68
LIME1-201ENST00000309546 K7ENP7 123 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 SLC25A14O95258 325 aaPredicted RBP19.32■□□□□ 0.68
LIME1-201ENST00000309546 NDST3O95803 873 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 LIPCP11150 499 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 CCL4P13236 92 aa19.32■□□□□ 0.68
LIME1-201ENST00000309546 CSF2RBP32927 897 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms