RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SLC22A18ASQ8N1D0 253 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 MPP5Q8N3R9 675 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 SDR16C5Q8N3Y7 309 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 OR56A4Q8NGH8 313 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 OR13C4Q8NGS5 318 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 ZNF398Q8TD17 642 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 SCG3Q8WXD2 468 aaKnown RBP17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 STAMBPL1Q96FJ0 436 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 PHOX2BQ99453 314 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 DPH5Q9H2P9 285 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 CHRAC1Q9NRG0 131 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 TREX1Q9NSU2 369 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 KLQ9UEF7 1012 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 FKBPLQ9UIM3 349 aa17.77■□□□□ 0.44
SSSCA1-201ENST00000309328 CEP192Q8TEP8 1941 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 ZFHX2Q9C0A1 2572 aaPredicted RBP17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 AGAP14A8MT82 685 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 FADS2P1A8MWK0 482 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 PATE3B3GLJ2 98 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 CFAP99D6REC4 459 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 F8W8V4 182 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 PFDN6O15212 129 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 BUD23O43709 281 aaKnown RBP17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 AVILO75366 819 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 USP1O94782 785 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 RASGRP1O95267 797 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 CSF2P04141 144 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 RALBP11234 206 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 NME1P15531 152 aaKnown RBP17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 PGAM1P18669 254 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 TGM1P22735 817 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 MC4RP32245 332 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 PLA2G5P39877 138 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 XIAPP98170 497 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 GUCY2DQ02846 1103 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 PPARDQ03181 441 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 SLC14A1Q13336 389 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 PEX6Q13608 980 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 CUL1Q13616 776 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 FZD2Q14332 565 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 SUZ12Q15022 739 aaKnown RBP17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 CHRNA6Q15825 494 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 HLA-BQ31612 363 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 INAVAQ3KP66 663 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 ATP13A5Q4VNC0 1218 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 KIAA0930Q6ICG6 404 aaPredicted RBP17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 TMEM135Q86UB9 458 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 DDHD1Q8NEL9 900 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 OR13J1Q8NGT2 312 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 ART4Q93070 314 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 ZNF514Q96K75 400 aaPredicted RBP17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 EDEM2Q9BV94 578 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 SLC13A1Q9BZW2 595 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 ASB8Q9H765 288 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 TRIM39Q9HCM9 518 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 TMEM9BQ9NQ34 198 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 GRHL1Q9NZI5 618 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 MTRF1LQ9UGC7 380 aaKnown RBP17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 CRLS1Q9UJA2 301 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 SLC17A4Q9Y2C5 497 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 KCTD3Q9Y597 815 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 PCDHGB2Q9Y5G2 931 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 SNX11Q9Y5W9 270 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 MAD1L1Q9Y6D9 718 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 CACNA1EQ15878 2313 aa17.76■□□□□ 0.43
SSSCA1-201ENST00000309328 USP34Q70CQ2 3546 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 A0A1B0GTQ1 180 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 IVLP07476 585 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 LIMK1P53667 647 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 ARHGAP8P85298 464 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 GTF2H3Q13889 308 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 CCDC6Q16204 474 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 ENPP7Q6UWV6 458 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 LAYNQ6UX15 382 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 SPATS2Q86XZ4 545 aaKnown RBP17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 LMNTD2Q8IXW0 634 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 SCARF2Q96GP6 870 aaPredicted RBP17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 SIGLEC10Q96LC7 697 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 TTC25Q96NG3 672 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 AGAP2Q99490 1192 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 EBNA1BP2Q99848 306 aaKnown RBP17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 GTPBP2Q9BX10 602 aaKnown RBP17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 GAREM1Q9H706 876 aa17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 DNAAF2Q9NVR5 837 aaKnown RBP17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 CNOT6Q9ULM6 557 aaKnown RBP17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 FNDC3AQ9Y2H6 1198 aaKnown RBP17.75■□□□□ 0.43
SSSCA1-201ENST00000309328 KLHL33A6NCF5 533 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 E7ESA3 106 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 GAPDHSO14556 408 aaPredicted RBP17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 TP73O15350 636 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 PCDHGA12O60330 932 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 TNFP01375 233 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 HK3P52790 923 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 PLTPP55058 493 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 SRP54P61011 504 aaKnown RBP17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 CRADDP78560 199 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 MRPS25P82663 173 aaKnown RBP17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 TMPRSS15P98073 1019 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 SLC7A5Q01650 507 aa17.74■□□□□ 0.43
SSSCA1-201ENST00000309328 BNC1Q01954 994 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms