RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RHOBTB1O94844 696 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 UNC5CO95185 931 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 HSPA4LO95757 839 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ASLP04424 464 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 SRPRAP08240 638 aaKnown RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 PKMP14618 531 aaKnown RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 CD1DP15813 335 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 SERPINB3P29508 390 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 FMO4P31512 558 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 PTGER3P43115 390 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 MAGEA9P43362 315 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 DGKGP49619 791 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 HK2P52789 917 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 AQP5P55064 265 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 COL19A1Q14993 1142 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 PTPRNQ16849 979 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 CTC1Q2NKJ3 1217 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 GAB4Q2WGN9 574 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 RARS2Q5T160 578 aaKnown RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 TRIM68Q6AZZ1 485 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 CERS6Q6ZMG9 384 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 TPRG1Q6ZUI0 275 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 USP45Q70EL2 814 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ISCA2Q86U28 154 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 SPNS2Q8IVW8 549 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 STK40Q8N2I9 435 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 CHST14Q8NCH0 376 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 MRPL38Q96DV4 380 aaKnown RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 UNKQ9C0B0 810 aaKnown RBP11.82□□□□□ -0.52
TRIM40-205ENST00000307859 P2RY12Q9H244 342 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 CCDC68Q9H2F9 335 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ZDHHC6Q9H6R6 413 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 ECT2Q9H8V3 914 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 SAR1AQ9NR31 198 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 PNPOQ9NVS9 261 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 TAS2R13Q9NYV9 303 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 GDE1Q9NZC3 331 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 SLC30A1Q9Y6M5 507 aa11.82□□□□□ -0.52
TRIM40-205ENST00000307859 TRBV5-4A0A0C4DH59 114 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 TSPAN11A1L157 253 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 A8MT66 165 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 NPHS1O60500 1241 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 ATP5HO75947 161 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 SNUPNO95149 360 aaKnown RBP11.81□□□□□ -0.52
TRIM40-205ENST00000307859 CLDN7O95471 211 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 PRAMEF1O95521 474 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 NFATC1O95644 943 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 ESR1P03372 595 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 UGT2B4P06133 528 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 ARSAP15289 507 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 BPIP17213 487 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 TFEBP19484 476 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 FCARP24071 287 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 SERPINB5P36952 375 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 NFKB2Q00653 900 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 PDAP1Q13442 181 aaKnown RBP11.81□□□□□ -0.52
TRIM40-205ENST00000307859 CTSL3PQ5NE16 218 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 CRTC1Q6UUV9 634 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 PIWIL4Q7Z3Z4 852 aaKnown RBP11.81□□□□□ -0.52
TRIM40-205ENST00000307859 MAVSQ7Z434 540 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 SNX20Q7Z614 316 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 C12orf40Q86WS4 652 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 SUGP1Q8IWZ8 645 aaKnown RBP11.81□□□□□ -0.52
TRIM40-205ENST00000307859 PAF1Q8N7H5 531 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 ZNF781Q8N8C0 355 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 CYB5D2Q8WUJ1 264 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 PPP2R3CQ969Q6 453 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 PTERQ96BW5 349 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 CDH19Q9H159 772 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 POMKQ9H5K3 350 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 SYTL2Q9HCH5 934 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 TXLNGQ9NUQ3 528 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 DNAJC28Q9NX36 388 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 APPL1Q9UKG1 709 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 RAP2CQ9Y3L5 183 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 CAPN7Q9Y6W3 813 aa11.81□□□□□ -0.52
TRIM40-205ENST00000307859 PTPRZ1P23471 2315 aaPredicted RBP11.8□□□□□ -0.52
TRIM40-205ENST00000307859 HEPACAM2A8MVW5 462 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 F8W8V4 182 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 ZBTB14O43829 449 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 BNIP3LO60238 219 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 OR1I1O60431 355 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 TULP3O75386 442 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 IPO13O94829 963 aaKnown RBP11.8□□□□□ -0.52
TRIM40-205ENST00000307859 PYGLP06737 847 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 CHRNGP07510 517 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 ITGALP20701 1170 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 RPS3P23396 243 aaKnown RBP eCLIP11.8□□□□□ -0.52
TRIM40-205ENST00000307859 SPAM1P38567 509 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 NNMTP40261 264 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 RECQLP46063 649 aaPredicted RBP11.8□□□□□ -0.52
TRIM40-205ENST00000307859 NAGLUP54802 743 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 ZBTB16Q05516 673 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 NFATC2Q13469 925 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 TUBB3Q13509 450 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 GRAMD4Q6IC98 578 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 FAM151BQ6UXP7 276 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 GDPD4Q6W3E5 623 aa11.8□□□□□ -0.52
TRIM40-205ENST00000307859 ASRGL1Q7L266 308 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms