RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 SHDQ96IW2 340 aa12.76□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TTC1Q99614 292 aa12.76□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 RSPH9Q9H1X1 276 aaPredicted RBP12.76□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 MLXIPLQ9NP71 852 aa12.76□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 LTB4R2Q9NPC1 389 aa12.76□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 FBXL21Q9UKT6 434 aa12.76□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 SARDHQ9UL12 918 aa12.76□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 EMCNQ9ULC0 261 aa12.76□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 MTF2Q9Y483 593 aaPredicted RBP12.76□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ZNF106Q9H2Y7 1883 aaKnown RBP12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 SCN8AQ9UQD0 1980 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TRIOO75962 3097 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 GLYATL1P3A0A0U1RQE8 302 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 KANSL1LA0AUZ9 987 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 H0Y858 1186 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PSMD11O00231 422 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 KLF11O14901 512 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 SLC4A1P02730 911 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PROCP04070 461 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 APOA4P06727 396 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 C1SP09871 688 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ITGALP20701 1170 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 FDXRP22570 491 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 MMP12P39900 470 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 SEC24CP53992 1094 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 DCDC1P59894 354 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 NFATC2Q13469 925 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ARHGEF7Q14155 803 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TSNAXIP1Q2TAA8 658 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ZRANB3Q5FWF4 1079 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 N4BP2L1Q5TBK1 243 aaPredicted RBP12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 FAM46CQ5VWP2 391 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 KIAA1211LQ6NV74 962 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PARS2Q7L3T8 475 aaKnown RBP12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TRMT11Q7Z4G4 463 aaKnown RBP12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TRIM42Q8IWZ5 723 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 SIX5Q8N196 739 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TXNDC5Q8NBS9 432 aaKnown RBP12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 GPR26Q8NDV2 337 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 RAB3IL1Q8TBN0 382 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ZNF398Q8TD17 642 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 RAB7BQ96AH8 199 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 UBXN10Q96LJ8 280 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 BIRC8Q96P09 236 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 CCT8L2Q96SF2 557 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 OLFM1Q99784 485 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PAIP2Q9BPZ3 127 aaKnown RBP12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 HDAC8Q9BY41 377 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 C12orf65Q9H3J6 166 aaKnown RBP12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PKD2L2Q9NZM6 624 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 MRPS17Q9Y2R5 130 aaKnown RBP12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 CRYL1Q9Y2S2 319 aa12.75□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 CHURC1-FNTBB4DL54 471 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 C1QTNF3-AMACRE9PGA6 284 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 KPNA3O00505 521 aaPredicted RBP12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 AREL1O15033 823 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 KLHL2O95198 593 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PRAMEF1O95521 474 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ESR1P03372 595 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 BPGMP07738 259 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PRSS56P0CW18 603 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 COL9A1P20849 921 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 DRD4P21917 467 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 XPAP23025 273 aaPredicted RBP12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 RPS3P23396 243 aaKnown RBP eCLIP12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 CDKN1CP49918 316 aaPredicted RBP12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 METAP1P53582 386 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 COPAP53621 1224 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TIAL1Q01085 375 aaKnown RBP eCLIP12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 CREB5Q02930 508 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ELP6Q0PNE2 266 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 RALGDSQ12967 914 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 CHRNA6Q15825 494 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ERAP2Q6P179 960 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 Q6ZS52 159 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 RAPH1Q70E73 1250 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TECPR1Q7Z6L1 1165 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TAX1BP1Q86VP1 789 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 NRSN1Q8IZ57 195 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 CENPLQ8N0S6 344 aaPredicted RBP12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PLD6Q8N2A8 252 aaKnown RBP12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 SYNPOQ8N3V7 929 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ARMC2Q8NEN0 867 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 RPLP0P6Q8NHW5 317 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ZNF75CPQ92670 426 aaPredicted RBP12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ARRDC3Q96B67 414 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 GPR78Q96P69 363 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 P2RY12Q9H244 342 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ASB8Q9H765 288 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TMEM216Q9P0N5 145 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 SIRPGQ9P1W8 387 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PCDHB1Q9Y5F3 818 aa12.74□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 TCP11X1B4DZS4 312 aa12.73□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 DLL1O00548 723 aa12.73□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PHGDHO43175 533 aaKnown RBP12.73□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 PKMP14618 531 aaKnown RBP12.73□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 HOXB2P14652 356 aa12.73□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 CDKN2DP55273 166 aa12.73□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 ZXDAP98168 799 aa12.73□□□□□ -0.37
SHANK2-AS3-201ENST00000307548 GAS6Q14393 721 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms