RNA–Protein interactions for RNA: ENST00000304004.7

POLR1C-201, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 1 (best) BASIC

Gene POLR1C, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-201ENST00000304004 GNPDA1P46926 289 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 NR0B2Q15466 257 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 SIX1Q15475 284 aaPredicted RBP16.04■□□□□ 0.16
POLR1C-201ENST00000304004 SMAD1Q15797 465 aaKnown RBP16.04■□□□□ 0.16
POLR1C-201ENST00000304004 PDPK2PQ6A1A2 396 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 RANBP10Q6VN20 620 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 REXO1L1PQ8IX06 675 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 GALNT15Q8N3T1 639 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 TRAM1L1Q8N609 369 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 ARL10Q8N8L6 244 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 KYQ8NBH2 561 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 C1orf54Q8WWF1 131 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 LRRC45Q96CN5 670 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 SCARF2Q96GP6 870 aaPredicted RBP16.04■□□□□ 0.16
POLR1C-201ENST00000304004 TBL1YQ9BQ87 522 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 APOL2Q9BQE5 337 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 SUDS3Q9H7L9 328 aaPredicted RBP16.04■□□□□ 0.16
POLR1C-201ENST00000304004 TRNAU1APQ9NX07 287 aaKnown RBP16.04■□□□□ 0.16
POLR1C-201ENST00000304004 VPS18Q9P253 973 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 CNOT6Q9ULM6 557 aaKnown RBP16.04■□□□□ 0.16
POLR1C-201ENST00000304004 SUFUQ9UMX1 484 aa16.04■□□□□ 0.16
POLR1C-201ENST00000304004 OAS3Q9Y6K5 1087 aaKnown RBP16.04■□□□□ 0.16
POLR1C-201ENST00000304004 CACNA1BQ00975 2339 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 FAM221BA6H8Z2 402 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 FGGP02679 453 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 FUCA1P04066 466 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 GP1BAP07359 652 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 MYF5P13349 255 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 POLD2P49005 469 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 RPIAP49247 311 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 ILF3Q12906 894 aaKnown RBP eCLIP16.03■□□□□ 0.16
POLR1C-201ENST00000304004 OLIG2Q13516 323 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 PARP6Q2NL67 630 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 GUSBP11Q6P575 273 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 TMPRSS7Q7RTY8 843 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 TAF8Q7Z7C8 310 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 MAIP1Q8WWC4 291 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 NAT6Q93015 286 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 OR2M4Q96R27 311 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 LRRC40Q9H9A6 602 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 SIRPGQ9P1W8 387 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 GPR34Q9UPC5 381 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 ZKSCAN5Q9Y2L8 839 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 TMEM98Q9Y2Y6 226 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 MSRB2Q9Y3D2 182 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 JRKLQ9Y4A0 524 aa16.03■□□□□ 0.16
POLR1C-201ENST00000304004 CEP104O60308 925 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 USP12O75317 370 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 METTL18O95568 372 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 ASMTLO95671 621 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 ATP1A1P05023 1023 aaKnown RBP16.02■□□□□ 0.16
POLR1C-201ENST00000304004 CD46P15529 392 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 STIP1P31948 543 aaKnown RBP16.02■□□□□ 0.16
POLR1C-201ENST00000304004 CXCR5P32302 372 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 SNX1Q13596 522 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 HES3Q5TGS1 186 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 ZDHHC20Q5W0Z9 365 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 KCTD11Q693B1 232 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 MARK2Q7KZI7 788 aaKnown RBP16.02■□□□□ 0.16
POLR1C-201ENST00000304004 GALNT13Q8IUC8 556 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 PHYKPLQ8IUZ5 450 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 CCL4L1Q8NHW4 92 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 IFI44Q8TCB0 444 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 GPBAR1Q8TDU6 330 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 GLYATL1Q969I3 302 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 GSDMCQ9BYG8 508 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 ARNT2Q9HBZ2 717 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 BPIFA1Q9NP55 256 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 IL17CQ9P0M4 197 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 FEZ2Q9UHY8 353 aaPredicted RBP16.02■□□□□ 0.16
POLR1C-201ENST00000304004 ZNF148Q9UQR1 794 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 PKP3Q9Y446 797 aa16.02■□□□□ 0.16
POLR1C-201ENST00000304004 POM121CA8CG34 1229 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 B4DGG1 531 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 PPFIA2O75334 1257 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 AP2A1O95782 977 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 IFNB1P01574 187 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 MSNP26038 577 aaKnown RBP16.01■□□□□ 0.15
POLR1C-201ENST00000304004 SPAM1P38567 509 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 ADCY8P40145 1251 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 E2F1Q01094 437 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 SPARCL1Q14515 664 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 TAF1AQ15573 450 aaPredicted RBP16.01■□□□□ 0.15
POLR1C-201ENST00000304004 CCNG2Q16589 344 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 PYCR3Q53H96 274 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 DENND5AQ6IQ26 1287 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 DRICH1Q6PGQ1 229 aaPredicted RBP16.01■□□□□ 0.15
POLR1C-201ENST00000304004 CCNI2Q6ZMN8 369 aaPredicted RBP16.01■□□□□ 0.15
POLR1C-201ENST00000304004 EFL1Q7Z2Z2 1120 aaKnown RBP16.01■□□□□ 0.15
POLR1C-201ENST00000304004 TMPRSS12Q86WS5 348 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 GATA6Q92908 595 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 VPS35Q96QK1 796 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 RMI1Q9H9A7 625 aa16.01■□□□□ 0.15
POLR1C-201ENST00000304004 CPED1A4D0V7 1026 aa16■□□□□ 0.15
POLR1C-201ENST00000304004 EME2A4GXA9 379 aaPredicted RBP16■□□□□ 0.15
POLR1C-201ENST00000304004 ERI2A8K979 691 aaKnown RBP16■□□□□ 0.15
POLR1C-201ENST00000304004 PSMD3O43242 534 aa16■□□□□ 0.15
POLR1C-201ENST00000304004 KIF5CO60282 957 aa16■□□□□ 0.15
POLR1C-201ENST00000304004 DNAJC6O75061 913 aa16■□□□□ 0.15
POLR1C-201ENST00000304004 LPOP22079 712 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms