RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 HMGB3O15347 200 aaKnown RBP16.68■□□□□ 0.26
PDS5A-201ENST00000303538 CLDN11O75508 207 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 PRNPP04156 253 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 MNDAP41218 407 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 ARFIP1P53367 373 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 RABGGTBP53611 331 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 SLC8B1Q6J4K2 584 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 ZBTB46Q86UZ6 589 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 C12orf56Q8IXR9 622 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 CNGB3Q9NQW8 809 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 XPR1Q9UBH6 696 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 CYP4F8P98187 520 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 FUT10Q6P4F1 479 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 ERVW-1Q9UQF0 538 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 FCF1Q9Y324 198 aaKnown RBP16.68■□□□□ 0.26
PDS5A-201ENST00000303538 NOS1APO75052 506 aaPredicted RBP16.68■□□□□ 0.26
PDS5A-201ENST00000303538 PSMD10O75832 226 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 CCL5P13501 91 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 GNPDA1P46926 289 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 SLC34A1Q06495 639 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 UBAP2LQ14157 1087 aaKnown RBP16.68■□□□□ 0.26
PDS5A-201ENST00000303538 GRM3Q14832 879 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 DLG2Q15700 870 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 CXorf56Q9H5V9 222 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 ARHGEF4Q9NR80 690 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 C2CD2Q9Y426 696 aa16.68■□□□□ 0.26
PDS5A-201ENST00000303538 SPATA31C2B4DYI2 1134 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 TPST2O60704 377 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 SIN3BO75182 1162 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 RLN1P04808 185 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 EPHA3P29320 983 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 ACTR3P61158 418 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 CXorf57Q6NSI4 855 aaKnown RBP16.67■□□□□ 0.26
PDS5A-201ENST00000303538 SLC47A1Q96FL8 570 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 BTN2A3PQ96KV6 586 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 C1QTNF1Q9BXJ1 281 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 ADAM7Q9H2U9 754 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 SRMSQ9H3Y6 488 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 PRDM8Q9NQV8 689 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 HBS1LQ9Y450 684 aaKnown RBP16.67■□□□□ 0.26
PDS5A-201ENST00000303538 PTCH2Q9Y6C5 1203 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 B4DGG1 531 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 CAP1Q01518 475 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 PIK3R6Q5UE93 754 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 PRSS55Q6UWB4 352 aaPredicted RBP16.67■□□□□ 0.26
PDS5A-201ENST00000303538 DCBLD1Q8N8Z6 715 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 HCAR2Q8TDS4 363 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.67■□□□□ 0.26
PDS5A-201ENST00000303538 PNO1Q9NRX1 252 aaKnown RBP16.67■□□□□ 0.26
PDS5A-201ENST00000303538 FBXO5Q9UKT4 447 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 OAS3Q9Y6K5 1087 aaKnown RBP16.67■□□□□ 0.26
PDS5A-201ENST00000303538 GLTPD2A6NH11 291 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 SLC5A3P53794 718 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 HTRA3P83110 453 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 TNK2Q07912 1038 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 HSDL1Q3SXM5 330 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 PTF1AQ7RTS3 328 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 ZNF280BQ86YH2 543 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 AUTS2Q8WXX7 1259 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 DUSP9Q99956 384 aaKnown RBP16.67■□□□□ 0.26
PDS5A-201ENST00000303538 ING3Q9NXR8 418 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 ACADLP28330 430 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 GRM5P41594 1212 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 UBXN11Q5T124 520 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 TMEM164Q5U3C3 297 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 TCEAL6Q6IPX3 200 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 FRRS1Q6ZNA5 592 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 TSTD1Q8NFU3 115 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 UBAP1Q9NZ09 502 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 MEGF6O75095 1541 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 AREL1O15033 823 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 PGRMC2O15173 223 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 HECTD2Q5U5R9 776 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 GALNT5Q7Z7M9 940 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 TRIM63Q969Q1 353 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 KAZALD1Q96I82 304 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 HIST1H2AAQ96QV6 131 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 BLOC1S4Q9NUP1 217 aa16.67■□□□□ 0.26
PDS5A-201ENST00000303538 HSPB3Q12988 150 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 ELOAQ14241 798 aaKnown RBP16.66■□□□□ 0.26
PDS5A-201ENST00000303538 TXNDC11Q6PKC3 985 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 DNAJC28Q9NX36 388 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 FAM86C2PA6NEL3 165 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 WRBO00258 174 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 KPNA4O00629 521 aaPredicted RBP16.66■□□□□ 0.26
PDS5A-201ENST00000303538 AZIN1O14977 448 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 RAB25P57735 213 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 PCBP1Q15365 356 aaKnown RBP eCLIP16.66■□□□□ 0.26
PDS5A-201ENST00000303538 UNC5BQ8IZJ1 945 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 TOP6BLQ8N6T0 577 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 FAM110BQ8TC76 370 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 IRAK3Q9Y616 596 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 MYDGFQ969H8 173 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 TIFAQ96CG3 184 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 PWWP2AQ96N64 755 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 LIASO43766 372 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 ATP6V1G2O95670 118 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 RIN1Q13671 783 aa16.66■□□□□ 0.26
PDS5A-201ENST00000303538 LARS2Q15031 903 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms