RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TXNRD2Q9NNW7 524 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 INTS10Q9NVR2 710 aaKnown RBP7.77□□□□□ -1.17
SCN9A-201ENST00000303354 PCDHA2Q9Y5H9 948 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 A0A0G2JLL6 359 aaPredicted RBP7.77□□□□□ -1.17
SCN9A-201ENST00000303354 SH3D21A4FU49 640 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 H3BQ06 376 aaPredicted RBP7.77□□□□□ -1.17
SCN9A-201ENST00000303354 FCHO1O14526 889 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 ATG13O75143 517 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 TGFB1P01137 390 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 TNFP01375 233 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 CNTFP26441 200 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 RAB10P61026 200 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 Q6ZVU0 165 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 PRRT2Q7Z6L0 340 aaPredicted RBP7.77□□□□□ -1.17
SCN9A-201ENST00000303354 CMTM8Q8IZV2 173 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 SPPL2BQ8TCT7 592 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 NELL1Q92832 810 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 QRFPRQ96P65 431 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 NOL11Q9H8H0 719 aaKnown RBP7.77□□□□□ -1.17
SCN9A-201ENST00000303354 SLC17A6Q9P2U8 582 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 EIF1AYO14602 144 aaKnown RBP7.77□□□□□ -1.17
SCN9A-201ENST00000303354 SERPINA1P01009 418 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 ADH5P11766 374 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 HOXB2P14652 356 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 PSEN1P49768 467 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 MBTD1Q05BQ5 628 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 LRRC32Q14392 662 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 ECHDC2Q86YB7 292 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 ZBTB2Q8N680 514 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 FBXL12Q9NXK8 326 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 MAGEC1O60732 1142 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 B4GALT2O60909 372 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 GOT2P00505 430 aaKnown RBP7.77□□□□□ -1.17
SCN9A-201ENST00000303354 ITGAVP06756 1048 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 GK5Q6ZS86 529 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 TMC3Q7Z5M5 1100 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 MYCBPAPQ8TBZ2 947 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 ACTRT2Q8TDY3 377 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 MRPL48Q96GC5 212 aaKnown RBP7.77□□□□□ -1.17
SCN9A-201ENST00000303354 L1RE1Q9UN81 338 aa7.77□□□□□ -1.17
SCN9A-201ENST00000303354 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 EFCAB10A6NFE3 127 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 ADAMTS3O15072 1205 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 PCDHGA12O60330 932 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 CPNE6O95741 557 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 GBAP04062 536 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 PRLRP16471 622 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 CXorf57Q6NSI4 855 aaKnown RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 CDC73Q6P1J9 531 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 C1orf127Q8N9H9 656 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 KYQ8NBH2 561 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SLC22A17Q8WUG5 538 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 TMEM209Q96SK2 561 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 TRIM8Q9BZR9 551 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 LMAN2LQ9H0V9 348 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 EPB41L4BQ9H329 900 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 IL21RQ9HBE5 538 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 NOD2Q9HC29 1040 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 HMGXB4Q9UGU5 601 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 ZNF510Q9Y2H8 683 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 KELP23276 732 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 CDKN1CP49918 316 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 MMP14P50281 582 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 PRAMEF14Q5SWL7 426 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SNX30Q5VWJ9 437 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 HIPK1Q86Z02 1210 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 APOPT1Q96IL0 206 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SLC39A8Q9C0K1 460 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 TBC1D14Q9P2M4 693 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SMAPO00193 183 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SAGP10523 405 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 NMBRP28336 390 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SPATC1Q76KD6 591 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 AHI1Q8N157 1196 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 GRHL3Q8TE85 626 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 CLEC4DQ8WXI8 215 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 EPB41L1Q9H4G0 881 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 WDR55Q9H6Y2 383 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 PCDH18Q9HCL0 1135 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 CHMP1AQ9HD42 196 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 STMN3Q9NZ72 180 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 TALDO1P37837 337 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 PUS10Q3MIT2 529 aaKnown RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 PAGE2Q7Z2X7 111 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 TRIM74Q86UV6 250 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 ZNF761Q86XN6 746 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 OXNAD1Q96HP4 312 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 STK39Q9UEW8 545 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 C3orf18Q9UK00 162 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 SH3GLB1Q9Y371 365 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 GPC6Q9Y625 555 aaPredicted RBP7.76□□□□□ -1.17
SCN9A-201ENST00000303354 KCNE2Q9Y6J6 123 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 RCCD1A6NED2 376 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 CST1P01037 141 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 VHLP40337 213 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 KCNQ1P51787 676 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 BTN3A2P78410 334 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 HMGN2P46Q86SG4 172 aa7.76□□□□□ -1.17
SCN9A-201ENST00000303354 JAZF1Q86VZ6 243 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms