RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 MAGEE2Q8TD90 523 aaPredicted RBP24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 RMDN1Q96DB5 314 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 CDKN2AIPNLQ96HQ2 116 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 TRMT13Q9NUP7 481 aaKnown RBP24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 ARMC1Q9NVT9 282 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 IRAK4Q9NWZ3 460 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 ZNF225Q9UK10 706 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 WASH4PA8MWX3 477 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 AKR1A1P14550 325 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 IL10P22301 178 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 GSK3BP49841 420 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 TMED1Q13445 227 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 HACD2Q6Y1H2 254 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 RALGPS2Q86X27 583 aaPredicted RBP24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 AARSD1Q9BTE6 412 aaKnown RBP24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 POLR1EQ9GZS1 481 aaKnown RBP24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 MARCH2Q9P0N8 246 aa24.26■■□□□ 1.47
SPTSSA-201ENST00000298130 BTN3A1O00481 513 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 RPP40O75818 363 aaKnown RBP24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 FASP25445 335 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 HTR7P34969 479 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 PYCR3Q53H96 274 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 OR2T11Q8NH01 316 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 FBXO32Q969P5 355 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 HSPBAP1Q96EW2 488 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 CCSER2Q9H7U1 834 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 AGPAT4Q9NRZ5 378 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 SCN4AP35499 1836 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 SCNN1BP51168 640 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 MERTKQ12866 999 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 TAF10Q12962 218 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 SERINC3Q13530 473 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 C18orf21Q32NC0 220 aaPredicted RBP24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 SYVN1Q86TM6 617 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 LRRC49Q8IUZ0 686 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 SDR39U1Q9NRG7 319 aaPredicted RBP24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 ABCD2Q9UBJ2 740 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 TMCO1Q9UM00 188 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 IQCF5A8MTL0 148 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 CTGFP29279 349 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 STC1P52823 247 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 NFKB2Q00653 900 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 LIPEQ05469 1076 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 INPP5AQ14642 412 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 BLOC1S3Q6QNY0 202 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 TEX26Q8N6G2 289 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 SIDT2Q8NBJ9 832 aaKnown RBP24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 DUS3LQ96G46 650 aaKnown RBP24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 HOPXQ9BPY8 73 aaPredicted RBP24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 SYT17Q9BSW7 474 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 ALG2Q9H553 416 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 PADI4Q9UM07 663 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 SCML2Q9UQR0 700 aa24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 ZFC3H1O60293 1989 aaKnown RBP24.25■■□□□ 1.47
SPTSSA-201ENST00000298130 GLTPD2A6NH11 291 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 TNPO2O14787 897 aaKnown RBP24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 SCAMP3O14828 347 aaKnown RBP24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 NIPSNAP2O75323 286 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 SH3BGRP55822 239 aaPredicted RBP24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 ATP6V0D1P61421 351 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 RBBP7Q16576 425 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 ZIK1Q3SY52 487 aaPredicted RBP24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 NADSYN1Q6IA69 706 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 A0A0J9YVX5 310 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 H0YJX3 145 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 PFDN1O60925 122 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 ZNF623O75123 536 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 FGF4P08620 206 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 CDK9P50750 372 aaKnown RBP24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 ATP4BP51164 291 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 EMP3P54852 163 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 TBC1D25Q3MII6 688 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 OTUD3Q5T2D3 398 aaPredicted RBP24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 BORAQ6PGQ7 559 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 CAMK1DQ8IU85 385 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 KIAA2013Q8IYS2 634 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 CDYL2Q8N8U2 506 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 TMEM125Q96AQ2 219 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 SEPT5Q99719 369 aaPredicted RBP24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 GPR45Q9Y5Y3 372 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 OAS3Q9Y6K5 1087 aaKnown RBP24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 MYO16Q9Y6X6 1858 aa24.24■■□□□ 1.47
SPTSSA-201ENST00000298130 LAMA2P24043 3122 aaKnown RBP24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 B4GAT1O43505 415 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 LCP2Q13094 533 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 PTPRNQ16849 979 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 TBPL2Q6SJ96 375 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 MINDY1Q8N5J2 469 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 VPS50Q96JG6 964 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 KCTD14Q9BQ13 255 aaPredicted RBP24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 CRISPLD1Q9H336 500 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 SLC52A3Q9NQ40 469 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 PCDHA9Q9Y5H5 950 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 MAGED1Q9Y5V3 778 aaPredicted RBP24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 NLRC5Q86WI3 1866 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 SNAP29O95721 258 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 PCNAP12004 261 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 PIANPQ8IYJ0 282 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 ATP6V0D2Q8N8Y2 350 aa24.23■■□□□ 1.47
SPTSSA-201ENST00000298130 BRSK1Q8TDC3 778 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 522.1 ms