RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 NODALQ96S42 347 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 TRMT13Q9NUP7 481 aaKnown RBP14.81□□□□□ -0.04
SPIDR-201ENST00000297423 CNOT11Q9UKZ1 510 aaKnown RBP14.81□□□□□ -0.04
SPIDR-201ENST00000297423 NUP205Q92621 2012 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 PIP5K1BO14986 540 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 C8BP07358 591 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 FCGR1AP12314 374 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 FCGRTP55899 365 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 CDH17Q12864 832 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 LRP8Q14114 963 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 CLIP3Q96DZ5 547 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 NANOGQ9H9S0 305 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 EXOSC4Q9NPD3 245 aaKnown RBP14.81□□□□□ -0.04
SPIDR-201ENST00000297423 MTMR10Q9NXD2 777 aa14.81□□□□□ -0.04
SPIDR-201ENST00000297423 PTBP2Q9UKA9 531 aaKnown RBP14.81□□□□□ -0.04
SPIDR-201ENST00000297423 CCDC154A6NI56 674 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 TSC22D2O75157 780 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 RECQL5O94762 991 aaPredicted RBP14.8□□□□□ -0.04
SPIDR-201ENST00000297423 CPB1P15086 417 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 DCKP27707 260 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 CDH5P33151 784 aaPredicted RBP14.8□□□□□ -0.04
SPIDR-201ENST00000297423 DIO3P55073 304 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 CACNB2Q08289 660 aaPredicted RBP14.8□□□□□ -0.04
SPIDR-201ENST00000297423 TRAP1Q12931 704 aaKnown RBP14.8□□□□□ -0.04
SPIDR-201ENST00000297423 GRB7Q14451 532 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 TBPL2Q6SJ96 375 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 ANKFN1Q8N957 763 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 TANKQ92844 425 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 TMBIM1Q969X1 311 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 MAGED4Q96JG8 741 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 TNFRSF12AQ9NP84 129 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 RIC8BQ9NVN3 520 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 FBXO5Q9UKT4 447 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 PCDHB3Q9Y5E6 796 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 STYXL1Q9Y6J8 313 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 COL1A2P08123 1366 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 IGKV6-21A0A0C4DH24 114 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 FAM47E-STBD1D6RA91 191 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 IPO13O94829 963 aaKnown RBP14.8□□□□□ -0.04
SPIDR-201ENST00000297423 PGK1P00558 417 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 CST1P01037 141 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 NDUFV1P49821 464 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 CRHR2Q13324 411 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 NAB1Q13506 487 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 HERC3Q15034 1050 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 CCL14Q16627 93 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 AASDHQ4L235 1098 aaPredicted RBP14.8□□□□□ -0.04
SPIDR-201ENST00000297423 ANKRD34AQ69YU3 496 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 ANKRD13BQ86YJ7 626 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 FAR1Q8WVX9 515 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 FAR2Q96K12 515 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 BEX2Q9BXY8 128 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 SEZ6LQ9BYH1 1024 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 IPO11Q9UI26 975 aaKnown RBP14.8□□□□□ -0.04
SPIDR-201ENST00000297423 SULT1C4O75897 302 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 SLC10A3P09131 477 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 PAMP19021 973 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 PTPN3P26045 913 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 CLDN10P78369 228 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 SLC36A3Q495N2 470 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 ATP6AP1LQ52LC2 224 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.8□□□□□ -0.04
SPIDR-201ENST00000297423 CDC26Q8NHZ8 85 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 CNIH3Q8TBE1 160 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 GAD1Q99259 594 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 MRPL57Q9BQC6 102 aaKnown RBP14.8□□□□□ -0.04
SPIDR-201ENST00000297423 STAP1Q9ULZ2 295 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 TCAF1Q9Y4C2 921 aa14.8□□□□□ -0.04
SPIDR-201ENST00000297423 TCRBV3S1A0A5B6 114 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 ALDH1A2O94788 518 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 PGLSO95336 258 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 MBL2P11226 248 aaPredicted RBP14.79□□□□□ -0.04
SPIDR-201ENST00000297423 BMP2P12643 396 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 CDH1P12830 882 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 FSHRP23945 695 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 TGFBR1P36897 503 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 RAB15P59190 212 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 TNK2Q07912 1038 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 TAZQ16635 292 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 NEPROQ6NW34 567 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 SPATC1Q76KD6 591 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 CEP295NLQ96MC4 621 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 NEK6Q9HC98 313 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 MCM3APO60318 1980 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 PPEF2O14830 753 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 ALOX5P09917 674 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 HLCSP50747 726 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 BEX3Q00994 111 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 UGT3A1Q6NUS8 523 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 MCOLN3Q8TDD5 553 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 STYXQ8WUJ0 223 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 OMA1Q96E52 524 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 C3orf30Q96M34 536 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 C16orf70Q9BSU1 422 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 MINDY3Q9H8M7 445 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 HACD3Q9P035 362 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 DKK3Q9UBP4 350 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 TNFSF13BQ9Y275 285 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 ZBTB42B2RXF5 422 aa14.79□□□□□ -0.04
SPIDR-201ENST00000297423 IFI30P13284 250 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms