RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 WASHC2DQ5SRD0 308 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 DPY19L4Q7Z388 723 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 UNC5BQ8IZJ1 945 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 NETO2Q8NC67 525 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 LCN9Q8WX39 176 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 AKAP1Q92667 903 aaKnown RBP eCLIP12.39□□□□□ -0.43
SLX4-201ENST00000294008 NXPE2Q96DL1 559 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 LINGO1Q96FE5 620 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 SLC5A7Q9GZV3 580 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 ATPIF1Q9UII2 106 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 DKKL1Q9UK85 242 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 ANKRD6Q9Y2G4 727 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 PCDHGA12O60330 932 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 GJB6O95452 261 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 IDSP22304 550 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 GRK6P43250 576 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 HERVK_113P62684 666 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 SCGB2B2Q4G0G5 96 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 PRAMEF17Q5VTA0 474 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 GPR139Q6DWJ6 353 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 VITQ6UXI7 678 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 FBXO22Q8NEZ5 403 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 PYDC1Q8WXC3 89 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 CLDND1Q9NY35 253 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 ENPP3O14638 875 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 RLN2P04090 185 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 ITGB1P05556 798 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 OR52J3Q8NH60 311 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 ZC3H10Q96K80 434 aaKnown RBP12.39□□□□□ -0.43
SLX4-201ENST00000294008 ZDHHC15Q96MV8 337 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 NFASCO94856 1347 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 SASH3O75995 380 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 ITGA5P08648 1049 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 CHRM5P08912 532 aaPredicted RBP12.39□□□□□ -0.43
SLX4-201ENST00000294008 SRGNP10124 158 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 PSMB4P28070 264 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 HNRNPH1P31943 449 aaKnown RBP12.39□□□□□ -0.43
SLX4-201ENST00000294008 CHST9Q7L1S5 443 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 OR52K2Q8NGK3 314 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 PABPC3Q9H361 631 aaKnown RBP12.39□□□□□ -0.43
SLX4-201ENST00000294008 ENAMQ9NRM1 1142 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 MAPKBP1O60336 1514 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 YAP1P46937 504 aaKnown RBP12.39□□□□□ -0.43
SLX4-201ENST00000294008 MXD1Q05195 221 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 C3orf33Q6P1S2 294 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 GPALPP1Q8IXQ4 340 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 DEPDC4Q8N2C3 294 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 ARL10Q8N8L6 244 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 LSM14AQ8ND56 463 aaKnown RBP12.39□□□□□ -0.43
SLX4-201ENST00000294008 OR5T1Q8NG75 326 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 GRHL3Q8TE85 626 aa12.39□□□□□ -0.43
SLX4-201ENST00000294008 DUS2Q9NX74 493 aaKnown RBP12.39□□□□□ -0.43
SLX4-201ENST00000294008 PER2O15055 1255 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 PGRP06401 933 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 ZNF8P17098 575 aaPredicted RBP12.38□□□□□ -0.43
SLX4-201ENST00000294008 SNU13P55769 128 aaKnown RBP12.38□□□□□ -0.43
SLX4-201ENST00000294008 GALNT18Q6P9A2 607 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 FMR1NBQ8N0W7 255 aaPredicted RBP12.38□□□□□ -0.43
SLX4-201ENST00000294008 TMEM145Q8NBT3 493 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 CASKIN2Q8WXE0 1202 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 GDAP2Q9NXN4 497 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLX4-201ENST00000294008 DEC1Q9P2X7 70 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 REV1Q9UBZ9 1251 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 ARPC2O15144 300 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 UBXN7O94888 489 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 RPLP2P05387 115 aaKnown RBP12.38□□□□□ -0.43
SLX4-201ENST00000294008 MC4RP32245 332 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 FMR1Q06787 632 aaKnown RBP eCLIP12.38□□□□□ -0.43
SLX4-201ENST00000294008 OR52K1Q8NGK4 314 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 SRMSQ9H3Y6 488 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 KCNE2Q9Y6J6 123 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 CPSF1Q10570 1443 aaKnown RBP12.38□□□□□ -0.43
SLX4-201ENST00000294008 OR2AT4A6NND4 320 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 PIGNO95427 931 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 CYP11B2P19099 503 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 TIE1P35590 1138 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 SEPHS1P49903 392 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 CDH15P55291 814 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 CD47Q08722 323 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 PTPRNQ16849 979 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 FAM153CQ494X1 144 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 AFTPHQ6ULP2 937 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 ARSKQ6UWY0 536 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 TSTD1Q8NFU3 115 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 OR10H4Q8NGA5 316 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 ETNPPLQ8TBG4 499 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 STAG3L4Q8TBR4 150 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 TATDN2Q93075 761 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 DNAJA3Q96EY1 480 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 EHD1Q9H4M9 534 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 FZD3Q9NPG1 666 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 POLR3BQ9NW08 1133 aaPredicted RBP12.38□□□□□ -0.43
SLX4-201ENST00000294008 UCKL1Q9NWZ5 548 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 SUV39H1O43463 412 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 NRP2O60462 931 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 IRF2P14316 349 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 PPATQ06203 517 aa12.38□□□□□ -0.43
SLX4-201ENST00000294008 C2orf80Q0P641 193 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms