RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 OLIG2Q13516 323 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 KYNUQ16719 465 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 PIP5KL1Q5T9C9 394 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 KIAA1161Q6NSJ0 714 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 KIAA0408Q6ZU52 694 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 ANKMY2Q8IV38 441 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 IQCKQ8N0W5 287 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 TXNDC5Q8NBS9 432 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 OR6K2Q8NGY2 324 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 LRRC8CQ8TDW0 803 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 CERS2Q96G23 380 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 LGALS13Q9UHV8 139 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 CRLS1Q9UJA2 301 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 CORO1CQ9ULV4 474 aaPredicted RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 REV3LO60673 3130 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 TCRBV9S1A1TA0A576 114 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 BANF1O75531 89 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM155BO75949 473 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 PDHA1P08559 390 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 CHRM3P20309 590 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 ARCN1P48444 511 aaKnown RBP8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 PSMD8P48556 350 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 MGAT5Q09328 741 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 RALGDSQ12967 914 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 SGCGQ13326 291 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 POU6F1Q14863 301 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 SPDYAQ5MJ70 313 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 FBXW10Q5XX13 1052 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 DOK6Q6PKX4 331 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 CRTC1Q6UUV9 634 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 HIPK4Q8NE63 616 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 OR13J1Q8NGT2 312 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 BLOC1S5Q8TDH9 187 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 NCLNQ969V3 563 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 ACOX2Q99424 681 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 APOL2Q9BQE5 337 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 TBC1D17Q9HA65 648 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 ZFYVE1Q9HBF4 777 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 SGK2Q9HBY8 427 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 SMOXQ9NWM0 555 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 SPO11Q9Y5K1 396 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 RPS6KL1Q9Y6S9 549 aa8.4□□□□□ -1.06
PTPDC1-201ENST00000288976 CDH23Q9H251 3354 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 AREL1O15033 823 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 STX7O15400 261 aaKnown RBP8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 SPINT1O43278 529 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 OXTRP30559 389 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 AARS2Q5JTZ9 985 aaKnown RBP8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 AGBL4Q5VU57 503 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 C3orf62Q6ZUJ4 267 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 SIX5Q8N196 739 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 RFWD2Q8NHY2 731 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC26A7Q8TE54 656 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 JADE3Q92613 823 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 CPNE1Q99829 537 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC13A1Q9BZW2 595 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 POLR3BQ9NW08 1133 aaPredicted RBP8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 KLF15Q9UIH9 416 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 PCDHGB4Q9UN71 923 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 VPS9D1Q9Y2B5 631 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 PKP3Q9Y446 797 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 TTC28Q96AY4 2481 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 CABIN1Q9Y6J0 2220 aa8.4□□□□□ -1.07
PTPDC1-201ENST00000288976 DNTTP04053 509 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 NUDT1P36639 197 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 SERPINB9P50453 376 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 SESN3P58005 492 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 UBXN2BQ14CS0 331 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 RASSF3Q86WH2 238 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 CAMKK1Q8N5S9 505 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 EDAQ92838 391 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 FCRL3Q96P31 734 aaPredicted RBP8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 SH3GL2Q99962 352 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 MCMBPQ9BTE3 642 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 PCED1AQ9H1Q7 454 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 MLXIPLQ9NP71 852 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 PCDH12Q9NPG4 1184 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 ZDHHC4Q9NPG8 344 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 IL17CQ9P0M4 197 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 SARDHQ9UL12 918 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 PLAAQ9Y263 795 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 NPIPB15A6NHN6 443 aaPredicted RBP8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 GSTA4O15217 222 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 CTSEP14091 401 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 NMBRP28336 390 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 GKP32189 559 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 P2RY2P41231 377 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 BLVRAP53004 296 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC29A2Q14542 456 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 IER5LQ5T953 404 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 EMC10Q5UCC4 262 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 RRM2BQ7LG56 351 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 KCNMB4Q86W47 210 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 SPEM1Q8N4L4 309 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 CHRAC1Q9NRG0 131 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 USP36Q9P275 1121 aaKnown RBP8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 APPL1Q9UKG1 709 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 RALBP11234 206 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 TPH1P17752 444 aa8.39□□□□□ -1.07
PTPDC1-201ENST00000288976 COL9A1P20849 921 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms