RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 VEPH1Q14D04 833 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 GPRIN3Q6ZVF9 776 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 TMIGD2Q96BF3 282 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 IL12RB2Q99665 862 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 PNMA8BQ9ULN7 279 aaPredicted RBP15.82■□□□□ 0.12
SMAD6-201ENST00000288840 FCF1Q9Y324 198 aaKnown RBP15.82■□□□□ 0.12
SMAD6-201ENST00000288840 RAI2Q9Y5P3 530 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 HEMK1Q9Y5R4 338 aaPredicted RBP15.82■□□□□ 0.12
SMAD6-201ENST00000288840 EI24O14681 340 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 SLC22A3O75751 556 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 RGS4P49798 205 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 UFM1P61960 85 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 LSM3P62310 102 aaKnown RBP15.82■□□□□ 0.12
SMAD6-201ENST00000288840 GNA12Q03113 381 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 LPIN1Q14693 890 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 FAM91A1Q658Y4 838 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 ITFG1Q8TB96 612 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 GRIN3AQ8TCU5 1115 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 SNX5Q9Y5X3 404 aa15.82■□□□□ 0.12
SMAD6-201ENST00000288840 CDK14O94921 469 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 C1RP00736 705 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 HLA-DPA1P20036 260 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 LPOP22079 712 aaPredicted RBP15.81■□□□□ 0.12
SMAD6-201ENST00000288840 CCND3P30281 292 aaPredicted RBP15.81■□□□□ 0.12
SMAD6-201ENST00000288840 HERVK_113P63132 956 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 AASDHQ4L235 1098 aaPredicted RBP15.81■□□□□ 0.12
SMAD6-201ENST00000288840 ANKRD46Q86W74 232 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 ERVK-6Q9BXR3 956 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 MRPS26Q9BYN8 205 aaKnown RBP15.81■□□□□ 0.12
SMAD6-201ENST00000288840 RUBCNLQ9H714 662 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 RAB26Q9ULW5 256 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 ECI2O75521 394 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 NDST3O95803 873 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 S1PR4O95977 384 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 CAPN1P07384 714 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 ALPIP09923 528 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 UGT1A1P22309 533 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 UGT1A4P22310 534 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 PRDX3P30048 256 aaKnown RBP15.81■□□□□ 0.12
SMAD6-201ENST00000288840 GKP32189 559 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 UGT1A3P35503 534 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 UGT1A5P35504 534 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 VAC14Q08AM6 782 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 ZNF678Q5SXM1 525 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 DBF4BQ8NFT6 615 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 IGSF5Q9NSI5 407 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 ETAA1Q9NY74 926 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 FADS3Q9Y5Q0 445 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 DNAJC15Q9Y5T4 150 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 MANSC4A6NHS7 340 aaPredicted RBP15.81■□□□□ 0.12
SMAD6-201ENST00000288840 ARNTP27540 789 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 XIAPP98170 497 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 OR4D1Q15615 310 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 UNC50Q53HI1 259 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 DENND5AQ6IQ26 1287 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 SPESP1Q6UW49 350 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 ISCA2Q86U28 154 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 EEF1AKMT1Q8WVE0 214 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 NRBF2Q96F24 287 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 FBXL20Q96IG2 436 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 OSBPL11Q9BXB4 747 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 DPY30Q9C005 99 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 ALG2Q9H553 416 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 TLR6Q9Y2C9 796 aa15.81■□□□□ 0.12
SMAD6-201ENST00000288840 C1orf232A0A0U1RR37 186 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 PKMP14618 531 aaKnown RBP15.8■□□□□ 0.12
SMAD6-201ENST00000288840 CORO1AP31146 461 aaKnown RBP15.8■□□□□ 0.12
SMAD6-201ENST00000288840 MYLK3Q32MK0 819 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 MSANTD2Q6P1R3 559 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 SLC24A5Q71RS6 500 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 CLEC14AQ86T13 490 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 CPSF7Q8N684 471 aaKnown RBP15.8■□□□□ 0.12
SMAD6-201ENST00000288840 KLHDC9Q8NEP7 349 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 SUSD3Q96L08 255 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 ARMC7Q9H6L4 198 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 KPNA6O60684 536 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 HMGCS1Q01581 520 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 RHDQ02161 417 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 BFSP2Q13515 415 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 ATP1A4Q13733 1029 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 IKBKEQ14164 716 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 SAPCD2Q86UD0 394 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 PCSK9Q8NBP7 692 aaKnown RBP15.8■□□□□ 0.12
SMAD6-201ENST00000288840 BRSK1Q8TDC3 778 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 PTCD2Q8WV60 388 aaKnown RBP15.8■□□□□ 0.12
SMAD6-201ENST00000288840 TSGA13Q96PP4 275 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 RTP3Q9BQQ7 232 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 GPR62Q9BZJ7 368 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 PCDH10Q9P2E7 1040 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 DOCK3Q8IZD9 2030 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 HS6ST1O60243 411 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 TBL1XO60907 577 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 CPSF4O95639 269 aaKnown RBP15.8■□□□□ 0.12
SMAD6-201ENST00000288840 ARCN1P48444 511 aaKnown RBP15.8■□□□□ 0.12
SMAD6-201ENST00000288840 SEMA3BQ13214 749 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 PRKG2Q13237 762 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 AP5B1Q2VPB7 878 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 LDLRAP1Q5SW96 308 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 SLC2A7Q6PXP3 512 aa15.8■□□□□ 0.12
SMAD6-201ENST00000288840 ZFP28Q8NHY6 868 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms