RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 TBC1D21Q8IYX1 336 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 NPLOC4Q8TAT6 608 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 BHMTQ93088 406 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 CYP2S1Q96SQ9 504 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 C1QTNF1Q9BXJ1 281 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 RIBC2Q9H4K1 309 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 BPIFA1Q9NP55 256 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 CCM2LQ9NUG4 571 aaPredicted RBP13.33□□□□□ -0.27
SCAF4-201ENST00000286835 LEF1Q9UJU2 399 aaPredicted RBP13.33□□□□□ -0.27
SCAF4-201ENST00000286835 VPS28Q9UK41 221 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 PADI4Q9UM07 663 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 ST3GAL5Q9UNP4 418 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 USP22Q9UPT9 525 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 SH3BP1Q9Y3L3 701 aa13.33□□□□□ -0.27
SCAF4-201ENST00000286835 IDO1P14902 403 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 SERPINB1P30740 379 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 SH3BP2P78314 561 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 CLCQ05315 142 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 PGS1Q32NB8 556 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 SLCO6A1Q86UG4 719 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 SNX29P2Q8IUI4 249 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 MFSD6LQ8IWD5 586 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 TERB1Q8NA31 727 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 OR13C4Q8NGS5 318 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 RBM38Q9H0Z9 239 aaKnown RBP13.33□□□□□ -0.28
SCAF4-201ENST00000286835 NOL6Q9H6R4 1146 aaKnown RBP13.33□□□□□ -0.28
SCAF4-201ENST00000286835 AGO3Q9H9G7 860 aaKnown RBP13.33□□□□□ -0.28
SCAF4-201ENST00000286835 FAIMQ9NVQ4 179 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 COMMD8Q9NX08 183 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 EVLQ9UI08 416 aaPredicted RBP13.33□□□□□ -0.28
SCAF4-201ENST00000286835 DNAJC15Q9Y5T4 150 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 ARL5AQ9Y689 179 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 LINC00854A0A1B0GVQ3 168 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 MEIS3P2A8K0S8 358 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 MATN3O15232 486 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 CD3EAPO15446 510 aaKnown RBP13.33□□□□□ -0.28
SCAF4-201ENST00000286835 AOC2O75106 756 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 FKBP9O95302 570 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 C8BP07358 591 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 CCNCP24863 283 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 SNX17Q15036 470 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 ZNF829Q3KNS6 432 aaPredicted RBP13.33□□□□□ -0.28
SCAF4-201ENST00000286835 CCNYL2Q5T2Q4 361 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 KIAA0930Q6ICG6 404 aaPredicted RBP13.33□□□□□ -0.28
SCAF4-201ENST00000286835 FKBP9P1Q75LS8 142 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 OR7A2PQ8NGA2 310 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 TAMM41Q96BW9 452 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 MTFMTQ96DP5 389 aaKnown RBP13.33□□□□□ -0.28
SCAF4-201ENST00000286835 SLC9A7Q96T83 725 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 TRMOQ9BU70 441 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 TAS2R13Q9NYV9 303 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.33□□□□□ -0.28
SCAF4-201ENST00000286835 SHROOM3Q8TF72 1996 aa13.33□□□□□ -0.28
SCAF4-201ENST00000286835 TYW5A2RUC4 315 aaKnown RBP13.32□□□□□ -0.28
SCAF4-201ENST00000286835 NPEPPSL1A6NEC2 478 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 BMP10O95393 424 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 ALDH7A1P49419 539 aaKnown RBP13.32□□□□□ -0.28
SCAF4-201ENST00000286835 ARHGDIAP52565 204 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 SLC10A7Q0GE19 358 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 PTPRNQ16849 979 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 FAM45BPQ6NSW5 357 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 SLC2A7Q6PXP3 512 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 GCNT7Q6ZNI0 430 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 CLHC1Q8NHS4 586 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 STAG3L4Q8TBR4 150 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 FAM45AQ8TCE6 357 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 SLCO4A1Q96BD0 722 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 FCRL5Q96RD9 977 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 SMURF2Q9HAU4 748 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 ABCB10Q9NRK6 738 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 MARCH4Q9P2E8 410 aaPredicted RBP13.32□□□□□ -0.28
SCAF4-201ENST00000286835 DERAQ9Y315 318 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 AQP12BA6NM10 295 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 BBIP1A8MTZ0 92 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 J3KR12 359 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 NADKO95544 446 aaPredicted RBP13.32□□□□□ -0.28
SCAF4-201ENST00000286835 ASGR1P07306 291 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 PRKACGP22612 351 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 ARSDP51689 593 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 DGKQP52824 942 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 CDKN2DP55273 166 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 CCL23P55773 120 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 C10orf120Q5SQS8 335 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 AQP12AQ8IXF9 295 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 SLC15A4Q8N697 577 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 PSMA8Q8TAA3 256 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 ELMO1Q92556 727 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 MEAF6Q9HAF1 191 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 CATSPERZQ9NTU4 200 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 ATAD3AQ9NVI7 634 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 TRPV2Q9Y5S1 764 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 CYBBP04839 570 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 THRBP10828 461 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 OR1E1P30953 314 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 SERPINB10P48595 397 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 TRPC1P48995 793 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 POLR2JP52435 117 aaKnown RBP13.32□□□□□ -0.28
SCAF4-201ENST00000286835 TWF1Q12792 350 aa13.32□□□□□ -0.28
SCAF4-201ENST00000286835 TSTA3Q13630 321 aaPredicted RBP13.32□□□□□ -0.28
SCAF4-201ENST00000286835 SIM2Q14190 667 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms