RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TRIM38O00635 465 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 TNFRSF10CO14798 259 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 TM4SF5O14894 197 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 GPR39O43194 453 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 TNFSF14O43557 240 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 UGT1A9O60656 530 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 SNX2O60749 519 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 SOD1P00441 154 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 CEACAM5P06731 702 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 FTH1P19P0C7X4 201 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 ACP5P13686 325 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 UGT1A6P19224 532 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 MSH3P20585 1137 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 ITGALP20701 1170 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 UGT1A1P22309 533 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 UGT1A4P22310 534 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 PBLDP30039 288 aaPredicted RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 MC4RP32245 332 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 UGT1A3P35503 534 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 UGT1A5P35504 534 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 TRIM23P36406 574 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 ADCY8P40145 1251 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 HADHAP40939 763 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 ACTR1BP42025 376 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 GRIA1P42261 906 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 RPIAP49247 311 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 FNTAP49354 379 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 DCDC1P59894 354 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 ACTR1AP61163 376 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 SARNPP82979 210 aaKnown RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 ITGA9Q13797 1035 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 NR0B2Q15466 257 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 SMAD1Q15797 465 aaKnown RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 INSCQ1MX18 579 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 ATP13A5Q4VNC0 1218 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 ZRANB3Q5FWF4 1079 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 CERCAMQ5T4B2 595 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 PAPD7Q5XG87 772 aaKnown RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 KCTD11Q693B1 232 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 PDPK2PQ6A1A2 396 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 ZCCHC8Q6NZY4 707 aaKnown RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 CASC4Q6P4E1 433 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 DET1Q7L5Y6 550 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 TAS2R42Q7RTR8 314 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 TRAPPC5Q8IUR0 188 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 RAVER1Q8IY67 606 aaKnown RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 OTUD6BQ8N6M0 293 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 PNPLA1Q8N8W4 532 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 FAM46DQ8NEK8 389 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 OR4C6Q8NH72 309 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 BRSK1Q8TDC3 778 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 PTCD2Q8WV60 388 aaKnown RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 GLYATL1Q969I3 302 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 DCUN1D1Q96GG9 259 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 DNAJC1Q96KC8 554 aaKnown RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 APOLD1Q96LR9 279 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 OR2M4Q96R27 311 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 GSDMCQ9BYG8 508 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 FRMD8Q9BZ67 464 aaPredicted RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 ZCCHC2Q9C0B9 1178 aaKnown RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 TMEM168Q9H0V1 697 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 OSGEPL1Q9H4B0 414 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 FAM96AQ9H5X1 160 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 ASB8Q9H765 288 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 UGT1A7Q9HAW7 530 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 UGT1A10Q9HAW8 530 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 UGT1A8Q9HAW9 530 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 IL17CQ9P0M4 197 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 FAM8A1Q9UBU6 413 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 APPL1Q9UKG1 709 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 PNMA8BQ9ULN7 279 aaPredicted RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 GPR34Q9UPC5 381 aa6.48□□□□□ -1.37
CD44-204ENST00000279452 OAS3Q9Y6K5 1087 aaKnown RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 ZFHX2Q9C0A1 2572 aaPredicted RBP6.48□□□□□ -1.37
CD44-204ENST00000279452 GPR179Q6PRD1 2367 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 OR2AG2A6NM03 316 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 LMO7DNF2Z398 122 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 AP3B1O00203 1094 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 YY2O15391 372 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 GRID2O43424 1007 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 CBFA2T3O75081 653 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 PPFIA2O75334 1257 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 RFPL3O75679 317 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 SRP72O76094 671 aaKnown RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 URI1O94763 535 aaPredicted RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 CDK14O94921 469 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 HOXC4P09017 264 aaPredicted RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 RALBP11234 206 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 ZNF8P17098 575 aaPredicted RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 CKMT2P17540 419 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 AK4P27144 223 aaPredicted RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 TEAD1P28347 426 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 DUSP3P51452 185 aaPredicted RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 ZNF140P52738 457 aaPredicted RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 ETF1P62495 437 aaKnown RBP6.47□□□□□ -1.37
CD44-204ENST00000279452 PRAMEP78395 509 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 CRADDP78560 199 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 CTBSQ01459 385 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 DR1Q01658 176 aa6.47□□□□□ -1.37
CD44-204ENST00000279452 LAMB3Q13751 1172 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms