RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 CPEB1Q9BZB8 566 aaKnown RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 MCOLN1Q9GZU1 580 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 ZNF385DQ9H6B1 395 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 EML4Q9HC35 981 aaKnown RBP16.53■□□□□ 0.24
CCDC40-201ENST00000269318 SLCO3A1Q9UIG8 710 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 SLC25A13Q9UJS0 675 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 PLA2G4CQ9UP65 541 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 PPIL1Q9Y3C6 166 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 WNT6Q9Y6F9 365 aa16.53■□□□□ 0.24
CCDC40-201ENST00000269318 UBXN8O00124 270 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 NEMP1O14524 444 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 UBFD1O14562 309 aaKnown RBP16.52■□□□□ 0.24
CCDC40-201ENST00000269318 DCXO43602 365 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 PRAMEF1O95521 474 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 CA3P07451 260 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 CPOXP36551 454 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 CCNHP51946 323 aaPredicted RBP16.52■□□□□ 0.24
CCDC40-201ENST00000269318 ECT2LQ008S8 904 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 DMC1Q14565 340 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 PDCD2Q16342 344 aaPredicted RBP16.52■□□□□ 0.24
CCDC40-201ENST00000269318 CARD16Q5EG05 197 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 PDE12Q6L8Q7 609 aaKnown RBP16.52■□□□□ 0.24
CCDC40-201ENST00000269318 FAM151BQ6UXP7 276 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 NKAPQ8N5F7 415 aaKnown RBP16.52■□□□□ 0.24
CCDC40-201ENST00000269318 PTGR2Q8N8N7 351 aaPredicted RBP16.52■□□□□ 0.24
CCDC40-201ENST00000269318 SIDT2Q8NBJ9 832 aaKnown RBP16.52■□□□□ 0.24
CCDC40-201ENST00000269318 ING5Q8WYH8 240 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 OTUB2Q96DC9 234 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 PPP1R36Q96LQ0 422 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 SUV39H2Q9H5I1 410 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 DENND2DQ9H6A0 471 aaPredicted RBP16.52■□□□□ 0.24
CCDC40-201ENST00000269318 IL26Q9NPH9 171 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 GTSE1Q9NYZ3 720 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 CDYLQ9Y232 598 aa16.52■□□□□ 0.24
CCDC40-201ENST00000269318 MYO7AQ13402 2215 aa16.52■□□□□ 0.23
CCDC40-201ENST00000269318 NPIPB15A6NHN6 443 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-201ENST00000269318 ZNF197O14709 1029 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 BPIP17213 487 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 GM2AP17900 193 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 CBX2Q14781 532 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-201ENST00000269318 NAA25Q14CX7 972 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 TMEM215Q68D42 235 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 DPY19L3Q6ZPD9 716 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 ACAD11Q709F0 780 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 TSPAN33Q86UF1 283 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 CBARPQ8N350 705 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-201ENST00000269318 STAG3L4Q8TBR4 150 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 AGAP11Q8TF27 550 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 CCDC97Q96F63 343 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-201ENST00000269318 SCRN2Q96FV2 425 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 FAR2Q96K12 515 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 TRBV5-4A0A0C4DH59 114 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 TRPC5OSA6NMA1 111 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 SDHDO14521 159 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 PRMT5O14744 637 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-201ENST00000269318 SUPT7LO94864 414 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 PRDX6P30041 224 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 CLCN7P51798 805 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 KLF10Q13118 480 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 NFATC2Q13469 925 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 WASHC2DQ5SRD0 308 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 CRTC1Q6UUV9 634 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 SNX20Q7Z614 316 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 SERPINA9Q86WD7 417 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 SUGP1Q8IWZ8 645 aaKnown RBP16.51■□□□□ 0.23
CCDC40-201ENST00000269318 CPSF7Q8N684 471 aaKnown RBP16.51■□□□□ 0.23
CCDC40-201ENST00000269318 POU5F2Q8N7G0 328 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 PAF1Q8N7H5 531 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 ITFG1Q8TB96 612 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 EXT2Q93063 718 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.51■□□□□ 0.23
CCDC40-201ENST00000269318 MCUR1Q96AQ8 359 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 CMTM5Q96DZ9 223 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 LRRC3BQ96PB8 259 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 MCCC1Q96RQ3 725 aaPredicted RBP16.51■□□□□ 0.23
CCDC40-201ENST00000269318 TRMT6Q9UJA5 497 aaKnown RBP16.51■□□□□ 0.23
CCDC40-201ENST00000269318 APPL1Q9UKG1 709 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 PCDHB1Q9Y5F3 818 aa16.51■□□□□ 0.23
CCDC40-201ENST00000269318 CDC7O00311 574 aa16.5■□□□□ 0.23
CCDC40-201ENST00000269318 TRIM24O15164 1050 aa16.5■□□□□ 0.23
CCDC40-201ENST00000269318 MAGEC1O60732 1142 aa16.5■□□□□ 0.23
CCDC40-201ENST00000269318 POP4O95707 220 aaKnown RBP16.5■□□□□ 0.23
CCDC40-201ENST00000269318 RPS3P23396 243 aaKnown RBP eCLIP16.5■□□□□ 0.23
CCDC40-201ENST00000269318 COPAP53621 1224 aa16.5■□□□□ 0.23
CCDC40-201ENST00000269318 TSNQ15631 228 aaKnown RBP16.5■□□□□ 0.23
CCDC40-201ENST00000269318 ACCSLQ4AC99 568 aa16.5■□□□□ 0.23
CCDC40-201ENST00000269318 DNAL1Q4LDG9 190 aa16.5■□□□□ 0.23
CCDC40-201ENST00000269318 ADGRD2Q7Z7M1 963 aa16.5■□□□□ 0.23
CCDC40-201ENST00000269318 RBM23Q86U06 439 aaKnown RBP16.5■□□□□ 0.23
CCDC40-201ENST00000269318 FUBP1Q96AE4 644 aaKnown RBP16.5■□□□□ 0.23
CCDC40-201ENST00000269318 ZNF641Q96N77 438 aaPredicted RBP16.5■□□□□ 0.23
CCDC40-201ENST00000269318 CD248Q9HCU0 757 aa16.5■□□□□ 0.23
CCDC40-201ENST00000269318 DPP7Q9UHL4 492 aa16.5■□□□□ 0.23
CCDC40-201ENST00000269318 MRPS23Q9Y3D9 190 aaKnown RBP16.5■□□□□ 0.23
CCDC40-201ENST00000269318 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
CCDC40-201ENST00000269318 IQCF5A8MTL0 148 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 WASH3PC4AMC7 463 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 CHUKO15111 745 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 BNIP3LO60238 219 aa16.49■□□□□ 0.23
CCDC40-201ENST00000269318 ECI2O75521 394 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms