RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 MATN1P21941 496 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 MZF1P28698 734 aaPredicted RBP15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 CXCR3P49682 368 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 YWHAHQ04917 246 aaPredicted RBP15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 TNK2Q07912 1038 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 DSC1Q08554 894 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 SLC36A3Q495N2 470 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 FAM209AQ5JX71 171 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 RSPO2Q6UXX9 243 aaPredicted RBP15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 MFSD2AQ8NA29 543 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 MROQ9BYG7 248 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 CSNK1G1Q9HCP0 422 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 TLK1Q9UKI8 766 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 TBX21Q9UL17 535 aa15.91■□□□□ 0.14
MAP1LC3B-201ENST00000268607 ZCWPW2A0A1B0GU75 182 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 DLX3O60479 287 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 CLTBP09497 229 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 CCNA2P20248 432 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 TTKP33981 857 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 TPTEP56180 551 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 SCAPQ12770 1279 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 FASTKQ14296 549 aaKnown RBP15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 GRM3Q14832 879 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 PGS1Q32NB8 556 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 TBCELQ5QJ74 424 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 FAM219BQ5XKK7 198 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 PRSS55Q6UWB4 352 aaPredicted RBP15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 PDZD4Q76G19 769 aaPredicted RBP15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 KDELC2Q7Z4H8 507 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 FSTL5Q8N475 847 aaPredicted RBP15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 ATAD1Q8NBU5 361 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 C1orf50Q9BV19 199 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 MLPHQ9BV36 600 aaPredicted RBP15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 C1QTNF1Q9BXJ1 281 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 FTHL17Q9BXU8 183 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 C11orf49Q9H6J7 331 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 PARVBQ9HBI1 364 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 EIF2B3Q9NR50 452 aaKnown RBP15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 IARS2Q9NSE4 1012 aaKnown RBP15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 MID2Q9UJV3 735 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 SLC27A5Q9Y2P5 690 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 TRIM64BA6NI03 449 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 BCL10O95999 233 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 SLC7A2P52569 658 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 SELENBP1Q13228 472 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 PELI3Q8N2H9 469 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 OR2T34Q8NGX1 318 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 OR2T3Q8NH03 318 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 SPATA22Q8NHS9 363 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 SOX17Q9H6I2 414 aaPredicted RBP15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 LRRC40Q9H9A6 602 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 NANOGQ9H9S0 305 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 CHRAC1Q9NRG0 131 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 NDFIP2Q9NV92 336 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 GTSE1Q9NYZ3 720 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 VANGL2Q9ULK5 521 aa15.9■□□□□ 0.14
MAP1LC3B-201ENST00000268607 PSMD11O00231 422 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CLOCKO15516 846 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NOL3O60936 208 aaKnown RBP15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 HNRNPLP14866 589 aaKnown RBP eCLIP15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PTPN2P17706 415 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DNASE1L3Q13609 305 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NDUFA5Q16718 116 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PPP1R3AQ16821 1122 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 DDR2Q16832 855 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SPOUT1Q5T280 376 aaKnown RBP15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ZNF354CQ86Y25 554 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MAELQ96JY0 434 aaKnown RBP15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MRASO14807 208 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 CLPXO76031 633 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 F9P00740 461 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 APOA4P06727 396 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 POLR2IP36954 125 aaKnown RBP15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 NKX2-5P52952 324 aaPredicted RBP15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ZNF460Q14592 562 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PLCL1Q15111 1095 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SAMD4BQ5PRF9 694 aaKnown RBP15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 RTP2Q5QGT7 225 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PM20D1Q6GTS8 502 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 KCNMB4Q86W47 210 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 OR9I1Q8NGQ6 314 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 PGAP3Q96FM1 320 aaPredicted RBP15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TSNARE1Q96NA8 513 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ARMC1Q9NVT9 282 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TMEM181Q9P2C4 612 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 XPR1Q9UBH6 696 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SARDHQ9UL12 918 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TRAF6Q9Y4K3 522 aa15.89■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TIMM44O43615 452 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 GMNNO75496 209 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 MT-CYBP00156 380 aaPredicted RBP15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 OPRL1P41146 370 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 ABRAXAS1Q6UWZ7 409 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 FRA10AC1Q70Z53 315 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SPPL2CQ8IUH8 684 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SPATA2LQ8IUW3 424 aaPredicted RBP15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 TERB1Q8NA31 727 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 RDH11Q8TC12 318 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 SPPL2BQ8TCT7 592 aa15.88■□□□□ 0.13
MAP1LC3B-201ENST00000268607 AUTS2Q8WXX7 1259 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms