RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 THAP5Q7Z6K1 395 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 STX19Q8N4C7 294 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 PNPT1Q8TCS8 783 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 RMND5AQ9H871 391 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 OXSMQ9NWU1 459 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 BTBD3Q9Y2F9 522 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 LOC100506127A0A0U1RQW1 187 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 A0A1W2PPW3 197 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 C9IYK1 514 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 PDLIM1O00151 329 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 IDH3BO43837 385 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 CST1P01037 141 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 HIST1H2AGP0C0S8 130 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 IDO1P14902 403 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 HOXB8P17481 243 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 HIST1H2ADP20671 130 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 ADRA1BP35368 520 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 CAPGP40121 348 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 ATXN1P54253 815 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 GNA12Q03113 381 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 NDUFA5Q16718 116 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 KLHL35Q6PF15 583 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 CAND1Q86VP6 1230 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 HIST1H2AHQ96KK5 128 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 ACOX2Q99424 681 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 HIST1H2AJQ99878 128 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 H2AFJQ9BTM1 129 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 HGH1Q9BTY7 390 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 ZNF696Q9H7X3 374 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 ARHGEF4Q9NR80 690 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 CNOT6Q9ULM6 557 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 EP400Q96L91 3159 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 ABHD14A-ACY1A0A1B0GW23 586 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 E7ENX8 843 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 BOLA2-SMG1P6H3BVE0 249 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 LINC00032P0C843 101 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 ATG14Q6ZNE5 492 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 AKAP14Q86UN6 197 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 HTRA1Q92743 480 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 C19orf60Q96EN9 201 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 PRICKLE1Q96MT3 831 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 IGFLR1Q9H665 355 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 CD320Q9NPF0 282 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 C2orf81A6NN90 581 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 EI24O14681 340 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 CYP11A1P05108 521 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 SERPINH1P50454 418 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 MGAT3Q09327 533 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 FAM91A1Q658Y4 838 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 CLEC6AQ6EIG7 209 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 UGT3A1Q6NUS8 523 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 SCIMPQ6UWF3 145 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 PYROXD2Q8N2H3 581 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 STAG3L4Q8TBR4 150 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 NTAN1Q96AB6 310 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 EPB41L1Q9H4G0 881 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 DPP7Q9UHL4 492 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 INVSQ9Y283 1065 aa11.49□□□□□ -0.57
CLSTN3-201ENST00000266546 SLC12A8A0AV02 714 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 C9JVG2 144 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 SPTLC1O15269 473 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 LRG1P02750 347 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 FGFR1P11362 822 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 TEX44Q53QW1 395 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 CCDC157Q569K6 752 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 NCCRP1Q6ZVX7 275 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 PAGE2Q7Z2X7 111 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 VPS37AQ8NEZ2 397 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 CLEC4CQ8WTT0 213 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 CHID1Q9BWS9 393 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 EIF2B3Q9NR50 452 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 MKS1Q9NXB0 559 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 ZDHHC7Q9NXF8 308 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 SUCOQ9UBS9 1254 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 FAM50BQ9Y247 325 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 SH3PXD2BA1X283 911 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 F5H5T6 163 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 BTN3A1O00481 513 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 ENPP3O14638 875 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 RECQL5O94762 991 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 PFKMP08237 780 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 DBTP11182 482 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 HOXC8P31273 242 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 TWF1Q12792 350 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 DSC3Q14574 896 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 CARTPTQ16568 116 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 FAM45BPQ6NSW5 357 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 PKN3Q6P5Z2 889 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 PAOXQ6QHF9 649 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 SZRD1Q7Z422 152 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 ZNF540Q8NDQ6 660 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 MCFD2Q8NI22 146 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 KBTBD7Q8WVZ9 684 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 ROPN1LQ96C74 230 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 ASIC4Q96FT7 647 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 OLFM1Q99784 485 aa11.48□□□□□ -0.57
CLSTN3-201ENST00000266546 NUAK2Q9H093 628 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms