RNA–Protein interactions for RNA: ENST00000264346.11

HERC6-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC6, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-201ENST00000264346 RTP2Q5QGT7 225 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 MSANTD2Q6P1R3 559 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 KIAA0408Q6ZU52 694 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 GPRIN3Q6ZVF9 776 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 SHKBP1Q8TBC3 707 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 LRTOMTQ8WZ04 291 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 TMEM161AQ9NX61 479 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 OPTCQ9UBM4 332 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 TMEM88BA6NKF7 163 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 ZNF487B1APH4 448 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 E7ENX8 843 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 KPNA3O00505 521 aaPredicted RBP12.51□□□□□ -0.41
HERC6-201ENST00000264346 SNNO75324 88 aaPredicted RBP12.51□□□□□ -0.41
HERC6-201ENST00000264346 CLDN11O75508 207 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 ABCB1P08183 1280 aaPredicted RBP12.51□□□□□ -0.41
HERC6-201ENST00000264346 CYP4F8P98187 520 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 CHRNB3Q05901 458 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 KRT33BQ14525 404 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 ACAP2Q15057 778 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 CRY1Q16526 586 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 KBTBD2Q8IY47 623 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 BRSK1Q8TDC3 778 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 SPATA16Q9BXB7 569 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 CFAP97Q9P2B7 532 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 CPQQ9Y646 472 aa12.51□□□□□ -0.41
HERC6-201ENST00000264346 C15orf38-AP3S2A0A0A6YYH1 394 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 ALDH1A2O94788 518 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 AP5B1Q2VPB7 878 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 ARPINQ7Z6K5 226 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 NKAPQ8N5F7 415 aaKnown RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 STYXQ8WUJ0 223 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 ANKRD49Q8WVL7 239 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 FUBP3Q96I24 572 aaKnown RBP eCLIP12.5□□□□□ -0.41
HERC6-201ENST00000264346 SLC45A3Q96JT2 553 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 ZNF558Q96NG5 402 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 SORT1Q99523 831 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 POLR3BQ9NW08 1133 aaPredicted RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 STK39Q9UEW8 545 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 NUMBLQ9Y6R0 609 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 A0A088AWK7 358 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 CFAP99D6REC4 459 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 I6L893 689 aaPredicted RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 LIN7AO14910 233 aaPredicted RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 GPR39O43194 453 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 OR1I1O60431 355 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 ZNF623O75123 536 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 SLC25A14O95258 325 aaPredicted RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 UGT2B4P06133 528 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 GSNP06396 782 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 ST8SIA6P61647 398 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 SCAPQ12770 1279 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 STARD3Q14849 445 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 PTPRRQ15256 657 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 NEDD8Q15843 81 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 SFT2D3Q587I9 215 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 CACHD1Q5VU97 1274 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 REP15Q6BDI9 236 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 OR52E8Q6IFG1 317 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 ZFP1Q6P2D0 407 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 C11orf96Q7Z7L8 435 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 CILP2Q8IUL8 1156 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 TLE6Q9H808 572 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 KIF17Q9P2E2 1029 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 SPASTQ9UBP0 616 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 PRPF19Q9UMS4 504 aaKnown RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 SCML2Q9UQR0 700 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 MTF2Q9Y483 593 aaPredicted RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 G3V2L1 256 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 HAS3O00219 553 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 CLOCKO15516 846 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 NTRK1P04629 796 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 UQCRBP14927 111 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 CHN2P52757 468 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 PPP1R8Q12972 351 aaKnown RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 AASDHQ4L235 1098 aaPredicted RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 AAGABQ6PD74 315 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 PGAM4Q8N0Y7 254 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 THAP11Q96EK4 314 aa12.5□□□□□ -0.41
HERC6-201ENST00000264346 MRPL17Q9NRX2 175 aaKnown RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.5□□□□□ -0.41
HERC6-201ENST00000264346 POLR3HQ9Y535 204 aaPredicted RBP12.5□□□□□ -0.41
HERC6-201ENST00000264346 ANKRD33BA6NCL7 494 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 SYN3O14994 580 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 PRAMEF1O95521 474 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 ACRP10323 421 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 EFNA1P20827 205 aaPredicted RBP12.49□□□□□ -0.41
HERC6-201ENST00000264346 KCNA5P22460 613 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 AGTR2P50052 363 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 HTRA3P83110 453 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 LIN52Q52LA3 116 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 CLLU1OSQ5K130 101 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 EFL1Q7Z2Z2 1120 aaKnown RBP12.49□□□□□ -0.41
HERC6-201ENST00000264346 ARHGAP12Q8IWW6 846 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 ACTRT2Q8TDY3 377 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 PTCD2Q8WV60 388 aaKnown RBP12.49□□□□□ -0.41
HERC6-201ENST00000264346 CDK5RAP1Q96SZ6 601 aaKnown RBP12.49□□□□□ -0.41
HERC6-201ENST00000264346 SMG9Q9H0W8 520 aaKnown RBP12.49□□□□□ -0.41
HERC6-201ENST00000264346 AKTIPQ9H8T0 292 aa12.49□□□□□ -0.41
HERC6-201ENST00000264346 LIN28AQ9H9Z2 209 aaKnown RBP12.49□□□□□ -0.41
HERC6-201ENST00000264346 OSER1Q9NX31 292 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms