RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 RGS16O15492 202 aaPredicted RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 CDH16O75309 829 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 PAK4O96013 591 aaPredicted RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 IVLP07476 585 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 CREB1P16220 341 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 SAT1P21673 171 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 PMLP29590 882 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 RPS9P46781 194 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 CACNG1Q06432 222 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 NFATC2Q13469 925 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 DBN1Q16643 649 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 RBM20Q5T481 1227 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 MRNIPQ6NTE8 343 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 ZNF449Q6P9G9 518 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 TSSK4Q6SA08 328 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 USP30Q70CQ3 517 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 SNX20Q7Z614 316 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 ZC3HC1Q86WB0 502 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 SERPINA9Q86WD7 417 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 TDRPQ86YL5 185 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 DEFB119Q8N690 84 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 GPR150Q8NGU9 434 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 CALML6Q8TD86 181 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 FAM136AQ96C01 138 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 AP2M1Q96CW1 435 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 NUS1Q96E22 293 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 PLEKHG4BQ96PX9 1271 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 NDNQ99608 321 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 RBBP8Q99708 897 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 CPNE1Q99829 537 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 MYOCQ99972 504 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 MCMBPQ9BTE3 642 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 BOCQ9BWV1 1114 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 CAB39LQ9H9S4 337 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 FZD3Q9NPG1 666 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 MBNL1Q9NR56 388 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 USP36Q9P275 1121 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 LGALS13Q9UHV8 139 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 MBD1Q9UIS9 605 aaPredicted RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 CRLS1Q9UJA2 301 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 APPL1Q9UKG1 709 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 SCML1Q9UN30 329 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 NOVA2Q9UNW9 492 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 EML5Q05BV3 1969 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 ABCA7Q8IZY2 2146 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 SDK1Q7Z5N4 2213 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 MUC3AQ02505 3323 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 UBA6A0AVT1 1052 aaPredicted RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 TMEM221A6NGB7 291 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 GOLGA8RI6L899 631 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 M0R296 226 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 PSMD11O00231 422 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 RAD51BO15315 384 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 INPP4BO15327 924 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 OPA1O60313 960 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 MTX2O75431 263 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 TM7SF2O76062 418 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 ITGA2BP08514 1039 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 ITGALP20701 1170 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 FMO4P31512 558 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 GP5P40197 560 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 CXCL12P48061 93 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 LEPRP48357 1165 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 CCDC15Q0P6D6 951 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 NAB1Q13506 487 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 KHDC1Q4VXA5 237 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 HENMT1Q5T8I9 393 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 GRTP1Q5TC63 336 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 ZNF549Q6P9A3 640 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 SDCCAG8Q86SQ7 713 aaPredicted RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 TRIM74Q86UV6 250 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 KBTBD6Q86V97 674 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 EFCAB3Q8N7B9 438 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 MZB1Q8WU39 189 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 TOE1Q96GM8 510 aaKnown RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 SGSM3Q96HU1 749 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 VPS39Q96JC1 886 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 SERAC1Q96JX3 654 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 SLC17A9Q9BYT1 436 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 BTBD1Q9H0C5 482 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 ACBD3Q9H3P7 528 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 C6orf106Q9H6K1 298 aaPredicted RBP9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 TXNDC16Q9P2K2 825 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 FETUBQ9UGM5 382 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 FZD4Q9ULV1 537 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 CA5BQ9Y2D0 317 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 PRSS21Q9Y6M0 314 aa9.67□□□□□ -0.86
SNRNP40-201ENST00000263694 TRBV5-4A0A0C4DH59 114 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 GOLGA6L10A6NI86 522 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 K7ESF4 209 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 SLC31A1O15431 190 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 NDUFS3O75489 264 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 APBB3O95704 486 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 SEMA4FO95754 770 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 SOD1P00441 154 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 PCCBP05166 539 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 SNRPAP09012 282 aaKnown RBP9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 KRT15P19012 456 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 AOC1P19801 751 aa9.66□□□□□ -0.86
SNRNP40-201ENST00000263694 OGNP20774 298 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 464.6 ms